Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0870.Seq
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 164 9e-40
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 146 2e-34
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 141 7e-33
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 113 2e-24
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 109 2e-23
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 71 9e-12
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 67 1e-10
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 64 1e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 58 1e-07
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 56 3e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 54 1e-06
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 54 1e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 49 4e-05
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 49 4e-05
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 49 5e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 48 9e-05
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 48 1e-04
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 47 2e-04
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 43 0.003
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 43 0.003
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 42 0.006
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 41 0.011
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 41 0.014
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 40 0.025
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 40 0.025
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 38 0.13
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.23
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.54
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.71
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.71
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 35 0.71
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 35 0.94
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 0.94
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 34 1.6
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 33 2.9
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 32 6.6
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 31 8.8
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 164 bits (398), Expect = 9e-40
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +2
Query: 2 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 181
+HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL
Sbjct: 15 SHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74
Query: 182 IKNGKKVTAFVPRDGCLNHIEENDE 256
IKNGKK+TAFVP DGCLN IEENDE
Sbjct: 75 IKNGKKITAFVPNDGCLNFIEENDE 99
Score = 67.3 bits (157), Expect = 1e-10
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +1
Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
VLVAGFGRKGHAVGDIPGVRFKVVKVANVSL K K+
Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 146 bits (354), Expect = 2e-34
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +2
Query: 5 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184
HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLI
Sbjct: 18 HRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLI 77
Query: 185 KNGKKVTAFVPRDGCLNHIEENDE 256
KNGKKVTAFVP DGCLN ++ENDE
Sbjct: 78 KNGKKVTAFVPNDGCLNFVDENDE 101
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +1
Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
VL+AGFGRKG A GDIPGVRFKVVKV+ VSL K K+
Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKK 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 141 bits (341), Expect = 7e-33
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = +2
Query: 5 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184
HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+
Sbjct: 87 HRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLV 145
Query: 185 KNGKKVTAFVPRDGCLNHIEEN 250
KNGKK+ AFVP DGCLN I+EN
Sbjct: 146 KNGKKIAAFVPNDGCLNFIKEN 167
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 113 bits (271), Expect = 2e-24
Identities = 50/83 (60%), Positives = 66/83 (79%)
Frame = +2
Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+QLIK
Sbjct: 15 RKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIK 74
Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256
NG+++TAF P DG +N I+E+DE
Sbjct: 75 NGRQITAFCPGDGAINFIDEHDE 97
Score = 38.7 bits (86), Expect = 0.058
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +1
Query: 274 GRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
GR G + GDIPGVRF+V KV +VSL KR
Sbjct: 105 GRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKR 137
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 109 bits (263), Expect = 2e-23
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +2
Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+K
Sbjct: 20 RQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVK 79
Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256
NGK VTAFVP DG LN+I E+DE
Sbjct: 80 NGKVVTAFVPLDGSLNYINEHDE 102
Score = 39.5 bits (88), Expect = 0.033
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348
G +G ++GDIPGVRFKV+KV VSL
Sbjct: 110 GPEGRSLGDIPGVRFKVIKVNGVSL 134
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 71.3 bits (167), Expect = 9e-12
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = -3
Query: 255 SSFSSMWFRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97
SSFSS F+QPS GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 50 SSFSSTKFKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -1
Query: 368 FLFVESERDTLATFTTLKRTPGMSPTA*PLRPNPATSTRRF 246
F F ++ ++T T TTL TPG+SP A PL P PA T F
Sbjct: 12 FSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSF 52
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 67.3 bits (157), Expect = 1e-10
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +2
Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV +
Sbjct: 20 RQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLI 79
Query: 188 N 190
N
Sbjct: 80 N 80
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 164 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256
CVRVQL KNGK VTAFVP DG LN I E+DE
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDE 616
Score = 37.9 bits (84), Expect = 0.10
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348
G +G A GD+PGVRFKV KV VSL
Sbjct: 624 GPEGRAYGDLPGVRFKVTKVNGVSL 648
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +1
Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
VL+AGFGRKGHAVGDIPGVRFKVVKV+ VSL K K+
Sbjct: 226 VLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKK 264
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 57.6 bits (133), Expect = 1e-07
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 74 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 56.4 bits (130), Expect = 3e-07
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = -2
Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38
G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL
Sbjct: 25 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84
Query: 37 FFVRPSLFTTV 5
FV P L +V
Sbjct: 85 LFVMPLLVPSV 95
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/71 (40%), Positives = 38/71 (53%)
Frame = -2
Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38
G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL
Sbjct: 56 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115
Query: 37 FFVRPSLFTTV 5
FV P L +V
Sbjct: 116 LFVMPLLVPSV 126
Score = 40.3 bits (90), Expect = 0.019
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = -3
Query: 387 MILVAPFSLCRERERHVGYFYHLKTNSGNVTDGVTFTTES 268
M L+A F L + ++R++GYF HLK +S ++T +TF+T+S
Sbjct: 1 MFLLAQFDL-QSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298
++++E++ R +K P V
Sbjct: 70 GHNLQEHNVVLVRVGRLKDCPGV 92
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 49.2 bits (112), Expect = 4e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 49.2 bits (112), Expect = 4e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 77 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG 110
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 48.0 bits (109), Expect = 9e-05
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298
++++E++ R V+ P V
Sbjct: 117 GHNLQEHNIVLCRVGRVQDCPGV 139
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2
Query: 62 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 242 EENDEY*WRDSVVKVTPSVTF 304
+E+ R VK P V +
Sbjct: 75 QEHSIVLVRGGRVKDLPGVRY 95
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/68 (35%), Positives = 44/68 (64%)
Frame = +2
Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVV 280
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ R V
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRGGRV 146
Query: 281 KVTPSVTF 304
+ P V +
Sbjct: 147 QDVPGVKY 154
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1
Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVK 330
VL++GFG KGHAVGDI GVRF+VVK
Sbjct: 69 VLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +2
Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQ 125
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +2
Query: 68 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 41.9 bits (94), Expect = 0.006
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = -2
Query: 214 DECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEF 35
+E HFL VL EL++DA ++G V LL F + DDA C +E + L R H F
Sbjct: 70 NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVS 127
Query: 34 FVRPSLFTTV 5
+ PSL ++V
Sbjct: 128 CIVPSLLSSV 137
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 41.1 bits (92), Expect = 0.011
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 40.7 bits (91), Expect = 0.014
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 62 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 242 EENDEY*WRDSVVKVTPSVTF 304
+E+ R VK P V +
Sbjct: 75 QEHAVVLVRGGRVKDLPGVRY 95
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 39.9 bits (89), Expect = 0.025
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +2
Query: 47 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++P
Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120
Query: 221 DGCLNHIEENDEY*WRDSVVKVTPSVTF 304
+G ++++E+ R K P V +
Sbjct: 121 EG--HNLQEHSVVLVRGGGAKDLPGVRY 146
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 39.9 bits (89), Expect = 0.025
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 37.5 bits (83), Expect = 0.13
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +2
Query: 41 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 221 DG 226
+G
Sbjct: 68 EG 69
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 36.7 bits (81), Expect = 0.23
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 41 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 221 DG 226
+G
Sbjct: 149 EG 150
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 35.5 bits (78), Expect = 0.54
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +2
Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217
KG+ ++ + K+PNSA RKC ++L NGK ++A++P
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP 73
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 35.1 bits (77), Expect = 0.71
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 59 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 238
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 239 IEENDEY*WRDSVVKVTPSVTF 304
++E+ R VK P V +
Sbjct: 74 LQEHSLVLVRGGRVKDLPGVQY 95
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 35.1 bits (77), Expect = 0.71
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 104 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVVK 283
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ R VK
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGRVK 88
Query: 284 VTPSVTF 304
P V F
Sbjct: 89 DLPGVKF 95
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 35.1 bits (77), Expect = 0.71
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +2
Query: 68 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 247
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 248 NDEY*WRDSVVKVTPSVTF 304
+D R V P V +
Sbjct: 77 HDRVLVRGGQVPDLPGVKY 95
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 34.7 bits (76), Expect = 0.94
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
G KG+ + V ++PNS +RK RV+L G+ VT VP +G
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG 172
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.7 bits (76), Expect = 0.94
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 119 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
+VG+ + K+PNS RK RV+L GK +TA++P +G
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 33.9 bits (74), Expect = 1.6
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 83 GGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY* 262
G +G+ L K+PNSA+ K +V+L N V A++P +G ++++E+
Sbjct: 88 GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144
Query: 263 WRDSVVKVTPSVTF 304
R VK P V F
Sbjct: 145 VRGGRVKDLPGVKF 158
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 33.1 bits (72), Expect = 2.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217
+G + + + K+PNSA RK ++L KN KK+ A++P
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP 65
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 192 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 5 HRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 178
H+R Q W K+F K + T+ + G H KG+++ K G + N + + +++
Sbjct: 30 HKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEKEKIE 89
Query: 179 LIK 187
L++
Sbjct: 90 LVQ 92
>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 507
Score = 31.5 bits (68), Expect = 8.8
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +2
Query: 35 EFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 214
+F+ G W N F A G + E + E K+PN++ + + + + +G TAF
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289
Query: 215 PRDGCLNHIEEND 253
CLN N+
Sbjct: 290 APIMCLNQAYYNE 302
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,981,375
Number of Sequences: 1657284
Number of extensions: 9339602
Number of successful extensions: 21597
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 20910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21586
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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