BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0870.Seq (449 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 164 9e-40 UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 146 2e-34 UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 141 7e-33 UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 113 2e-24 UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 109 2e-23 UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 71 9e-12 UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 67 1e-10 UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 64 1e-09 UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 58 1e-07 UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 56 3e-07 UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 54 1e-06 UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 54 1e-06 UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 49 4e-05 UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 49 4e-05 UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 49 5e-05 UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 48 9e-05 UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 48 1e-04 UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 47 2e-04 UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04 UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 43 0.003 UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 43 0.003 UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 42 0.006 UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 41 0.011 UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 41 0.014 UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 40 0.025 UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 40 0.025 UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 38 0.13 UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.23 UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.54 UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.71 UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 35 0.71 UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 35 0.71 UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 35 0.94 UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 0.94 UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 34 1.6 UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 33 2.9 UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0 UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 32 6.6 UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 31 8.8 >UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human) Length = 143 Score = 164 bits (398), Expect = 9e-40 Identities = 73/85 (85%), Positives = 80/85 (94%) Frame = +2 Query: 2 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 181 +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL Sbjct: 15 SHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74 Query: 182 IKNGKKVTAFVPRDGCLNHIEENDE 256 IKNGKK+TAFVP DGCLN IEENDE Sbjct: 75 IKNGKKITAFVPNDGCLNFIEENDE 99 Score = 67.3 bits (157), Expect = 1e-10 Identities = 33/39 (84%), Positives = 34/39 (87%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSL K K+ Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138 >UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular organisms|Rep: 40S ribosomal protein S23 - Saccharomyces cerevisiae (Baker's yeast) Length = 145 Score = 146 bits (354), Expect = 2e-34 Identities = 63/84 (75%), Positives = 75/84 (89%) Frame = +2 Query: 5 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184 HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLI Sbjct: 18 HRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLI 77 Query: 185 KNGKKVTAFVPRDGCLNHIEENDE 256 KNGKKVTAFVP DGCLN ++ENDE Sbjct: 78 KNGKKVTAFVPNDGCLNFVDENDE 101 Score = 57.2 bits (132), Expect = 2e-07 Identities = 28/39 (71%), Positives = 31/39 (79%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 VL+AGFGRKG A GDIPGVRFKVVKV+ VSL K K+ Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKK 140 >UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4; Oryza sativa|Rep: Putative 40s ribosomal protein S23 - Oryza sativa (Rice) Length = 301 Score = 141 bits (341), Expect = 7e-33 Identities = 61/82 (74%), Positives = 70/82 (85%) Frame = +2 Query: 5 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184 HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+ Sbjct: 87 HRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLV 145 Query: 185 KNGKKVTAFVPRDGCLNHIEEN 250 KNGKK+ AFVP DGCLN I+EN Sbjct: 146 KNGKKIAAFVPNDGCLNFIKEN 167 >UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular organisms|Rep: 30S ribosomal protein S12P - Uncultured methanogenic archaeon RC-I Length = 142 Score = 113 bits (271), Expect = 2e-24 Identities = 50/83 (60%), Positives = 66/83 (79%) Frame = +2 Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187 R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+QLIK Sbjct: 15 RKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIK 74 Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256 NG+++TAF P DG +N I+E+DE Sbjct: 75 NGRQITAFCPGDGAINFIDEHDE 97 Score = 38.7 bits (86), Expect = 0.058 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = +1 Query: 274 GRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 GR G + GDIPGVRF+V KV +VSL KR Sbjct: 105 GRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKR 137 >UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum aerophilum Length = 147 Score = 109 bits (263), Expect = 2e-23 Identities = 51/83 (61%), Positives = 65/83 (78%) Frame = +2 Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187 R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+K Sbjct: 20 RQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVK 79 Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256 NGK VTAFVP DG LN+I E+DE Sbjct: 80 NGKVVTAFVPLDGSLNYINEHDE 102 Score = 39.5 bits (88), Expect = 0.033 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = +1 Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348 G +G ++GDIPGVRFKV+KV VSL Sbjct: 110 GPEGRSLGDIPGVRFKVIKVNGVSL 134 >UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; Candida albicans|Rep: Putative uncharacterized protein - Candida albicans (Yeast) Length = 102 Score = 71.3 bits (167), Expect = 9e-12 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = -3 Query: 255 SSFSSMWFRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97 SSFSS F+QPS GT AVTF PFL++ T TH +AE GCL S P FS+T+P A Sbjct: 50 SSFSSTKFKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102 Score = 42.7 bits (96), Expect = 0.004 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = -1 Query: 368 FLFVESERDTLATFTTLKRTPGMSPTA*PLRPNPATSTRRF 246 F F ++ ++T T TTL TPG+SP A PL P PA T F Sbjct: 12 FSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSF 52 >UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; cellular organisms|Rep: Protein splicing (Intein) site - Caldivirga maquilingensis IC-167 Length = 661 Score = 67.3 bits (157), Expect = 1e-10 Identities = 31/61 (50%), Positives = 44/61 (72%) Frame = +2 Query: 8 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187 R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV + Sbjct: 20 RQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLI 79 Query: 188 N 190 N Sbjct: 80 N 80 Score = 50.0 bits (114), Expect = 2e-05 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +2 Query: 164 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256 CVRVQL KNGK VTAFVP DG LN I E+DE Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDE 616 Score = 37.9 bits (84), Expect = 0.10 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +1 Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348 G +G A GD+PGVRFKV KV VSL Sbjct: 624 GPEGRAYGDLPGVRFKVTKVNGVSL 648 >UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea mays|Rep: Putative 40S ribosomal protein - Zea mays (Maize) Length = 309 Score = 64.1 bits (149), Expect = 1e-09 Identities = 30/39 (76%), Positives = 33/39 (84%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 VL+AGFGRKGHAVGDIPGVRFKVVKV+ VSL K K+ Sbjct: 226 VLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKK 264 >UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial ribosomal protein S12; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to mitochondrial ribosomal protein S12 - Nasonia vitripennis Length = 173 Score = 57.6 bits (133), Expect = 1e-07 Identities = 28/51 (54%), Positives = 38/51 (74%) Frame = +2 Query: 74 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132 >UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330001L23 product:hypothetical protein, full insert sequence; n=8; Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330001L23 product:hypothetical protein, full insert sequence - Mus musculus (Mouse) Length = 154 Score = 56.4 bits (130), Expect = 3e-07 Identities = 30/71 (42%), Positives = 39/71 (54%) Frame = -2 Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38 G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGFL Sbjct: 25 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84 Query: 37 FFVRPSLFTTV 5 FV P L +V Sbjct: 85 LFVMPLLVPSV 95 >UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein; n=1; Mus musculus|Rep: PREDICTED: hypothetical protein - Mus musculus Length = 143 Score = 54.4 bits (125), Expect = 1e-06 Identities = 29/71 (40%), Positives = 38/71 (53%) Frame = -2 Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38 G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGFL Sbjct: 56 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115 Query: 37 FFVRPSLFTTV 5 FV P L +V Sbjct: 116 LFVMPLLVPSV 126 Score = 40.3 bits (90), Expect = 0.019 Identities = 18/40 (45%), Positives = 30/40 (75%) Frame = -3 Query: 387 MILVAPFSLCRERERHVGYFYHLKTNSGNVTDGVTFTTES 268 M L+A F L + ++R++GYF HLK +S ++T +TF+T+S Sbjct: 1 MFLLAQFDL-QSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39 >UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3; Coelomata|Rep: Mitochondrial ribosomal protein S12 - Bombyx mori (Silk moth) Length = 111 Score = 54.4 bits (125), Expect = 1e-06 Identities = 32/83 (38%), Positives = 50/83 (60%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229 H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69 Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298 ++++E++ R +K P V Sbjct: 70 GHNLQEHNVVLVRVGRLKDCPGV 92 >UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila melanogaster (Fruit fly) Length = 154 Score = 49.2 bits (112), Expect = 4e-05 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113 >UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial precursor; n=7; Coelomata|Rep: 40S ribosomal protein S12, mitochondrial precursor - Drosophila melanogaster (Fruit fly) Length = 140 Score = 49.2 bits (112), Expect = 4e-05 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99 >UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis (African clawed frog) Length = 150 Score = 48.8 bits (111), Expect = 5e-05 Identities = 24/50 (48%), Positives = 33/50 (66%) Frame = +2 Query: 77 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG 110 >UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal protein S12, mitochondrial precursor (MT-RPS12) (Technical knockout locus protein); n=2; Coelomata|Rep: PREDICTED: similar to 40S ribosomal protein S12, mitochondrial precursor (MT-RPS12) (Technical knockout locus protein) - Tribolium castaneum Length = 156 Score = 48.0 bits (109), Expect = 9e-05 Identities = 29/83 (34%), Positives = 48/83 (57%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229 H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116 Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298 ++++E++ R V+ P V Sbjct: 117 GHNLQEHNIVLCRVGRVQDCPGV 139 >UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular organisms|Rep: 30S ribosomal protein S12 - Aquifex aeolicus Length = 128 Score = 47.6 bits (108), Expect = 1e-04 Identities = 29/81 (35%), Positives = 45/81 (55%) Frame = +2 Query: 62 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241 K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++ Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74 Query: 242 EENDEY*WRDSVVKVTPSVTF 304 +E+ R VK P V + Sbjct: 75 QEHSIVLVRGGRVKDLPGVRY 95 >UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Saccharomycetales|Rep: 30S ribosomal protein S12 - Lodderomyces elongisporus (Yeast) (Saccharomyces elongisporus) Length = 183 Score = 47.2 bits (107), Expect = 2e-04 Identities = 24/68 (35%), Positives = 44/68 (64%) Frame = +2 Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVV 280 +G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ R V Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRGGRV 146 Query: 281 KVTPSVTF 304 + P V + Sbjct: 147 QDVPGVKY 154 >UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 128 Score = 46.8 bits (106), Expect = 2e-04 Identities = 20/25 (80%), Positives = 23/25 (92%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVK 330 VL++GFG KGHAVGDI GVRF+VVK Sbjct: 69 VLISGFGHKGHAVGDIRGVRFEVVK 93 >UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 157 Score = 43.2 bits (97), Expect = 0.003 Identities = 24/57 (42%), Positives = 36/57 (63%) Frame = +2 Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256 G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ + Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQ 125 >UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial precursor; n=13; Deuterostomia|Rep: 28S ribosomal protein S12, mitochondrial precursor - Homo sapiens (Human) Length = 138 Score = 43.2 bits (97), Expect = 0.003 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +2 Query: 68 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99 >UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep: Em1-tg19B - Euplotes aediculatus Length = 139 Score = 41.9 bits (94), Expect = 0.006 Identities = 28/70 (40%), Positives = 39/70 (55%) Frame = -2 Query: 214 DECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEF 35 +E HFL VL EL++DA ++G V LL F + DDA C +E + L R H F Sbjct: 70 NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVS 127 Query: 34 FVRPSLFTTV 5 + PSL ++V Sbjct: 128 CIVPSLLSSV 137 >UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12, mitochondrial precursor - Saccharomyces cerevisiae (Baker's yeast) Length = 153 Score = 41.1 bits (92), Expect = 0.011 Identities = 20/42 (47%), Positives = 30/42 (71%) Frame = +2 Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99 >UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; n=5; cellular organisms|Rep: Chloroplast 30S ribosomal protein S12 - Chlamydomonas reinhardtii Length = 133 Score = 40.7 bits (91), Expect = 0.014 Identities = 28/81 (34%), Positives = 42/81 (51%) Frame = +2 Query: 62 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241 K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++ Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74 Query: 242 EENDEY*WRDSVVKVTPSVTF 304 +E+ R VK P V + Sbjct: 75 QEHAVVLVRGGRVKDLPGVRY 95 >UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; Dikarya|Rep: Ribosomal protein S12, putative - Cryptococcus neoformans (Filobasidiella neoformans) Length = 176 Score = 39.9 bits (89), Expect = 0.025 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 47 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220 A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++P Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120 Query: 221 DGCLNHIEENDEY*WRDSVVKVTPSVTF 304 +G ++++E+ R K P V + Sbjct: 121 EG--HNLQEHSVVLVRGGGAKDLPGVRY 146 >UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal protein subunit S12 - Schizosaccharomyces pombe (Fission yeast) Length = 146 Score = 39.9 bits (89), Expect = 0.025 Identities = 19/47 (40%), Positives = 29/47 (61%) Frame = +2 Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92 >UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3; Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 - Toxoplasma gondii Length = 121 Score = 37.5 bits (83), Expect = 0.13 Identities = 19/62 (30%), Positives = 36/62 (58%) Frame = +2 Query: 41 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220 K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67 Query: 221 DG 226 +G Sbjct: 68 EG 69 >UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces capsulatus NAm1|Rep: Predicted protein - Ajellomyces capsulatus NAm1 Length = 208 Score = 36.7 bits (81), Expect = 0.23 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = +2 Query: 41 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220 +K K + G KG+ L+ + K+PNS RK R++L NG VT ++P Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148 Query: 221 DG 226 +G Sbjct: 149 EG 150 >UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 110 Score = 35.5 bits (78), Expect = 0.54 Identities = 16/39 (41%), Positives = 27/39 (69%) Frame = +2 Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217 KG+ ++ + K+PNSA RKC ++L NGK ++A++P Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP 73 >UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3; Eukaryota|Rep: Mitochondrial ribosomal protein S12 - Chondrus crispus (Carragheen) Length = 127 Score = 35.1 bits (77), Expect = 0.71 Identities = 25/82 (30%), Positives = 39/82 (47%) Frame = +2 Query: 59 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 238 TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G + Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73 Query: 239 IEENDEY*WRDSVVKVTPSVTF 304 ++E+ R VK P V + Sbjct: 74 LQEHSLVLVRGGRVKDLPGVQY 95 >UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=1255; cellular organisms|Rep: Mitochondrial ribosomal protein S12 - Arabidopsis thaliana (Mouse-ear cress) Length = 125 Score = 35.1 bits (77), Expect = 0.71 Identities = 22/67 (32%), Positives = 36/67 (53%) Frame = +2 Query: 104 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVVK 283 G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ R VK Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGRVK 88 Query: 284 VTPSVTF 304 P V F Sbjct: 89 DLPGVKF 95 >UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular organisms|Rep: 30S ribosomal protein S12 - Rickettsia conorii Length = 129 Score = 35.1 bits (77), Expect = 0.71 Identities = 26/79 (32%), Positives = 40/79 (50%) Frame = +2 Query: 68 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 247 ++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76 Query: 248 NDEY*WRDSVVKVTPSVTF 304 +D R V P V + Sbjct: 77 HDRVLVRGGQVPDLPGVKY 95 >UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; Babesia bovis|Rep: Ribosomal protein S12, putative - Babesia bovis Length = 294 Score = 34.7 bits (76), Expect = 0.94 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +2 Query: 86 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 G KG+ + V ++PNS +RK RV+L G+ VT VP +G Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG 172 >UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; Chaetomium globosum|Rep: Putative uncharacterized protein - Chaetomium globosum (Soil fungus) Length = 141 Score = 34.7 bits (76), Expect = 0.94 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 119 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 +VG+ + K+PNS RK RV+L GK +TA++P +G Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84 >UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial precursor; n=2; Eukaryota|Rep: 40S ribosomal protein S12, mitochondrial precursor - Oenothera hookeri (Hooker's evening primrose) Length = 188 Score = 33.9 bits (74), Expect = 1.6 Identities = 23/74 (31%), Positives = 37/74 (50%) Frame = +2 Query: 83 GGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY* 262 G +G+ L K+PNSA+ K +V+L N V A++P +G ++++E+ Sbjct: 88 GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144 Query: 263 WRDSVVKVTPSVTF 304 R VK P V F Sbjct: 145 VRGGRVKDLPGVKF 158 >UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; Theileria parva|Rep: Ribosomal protein S12, putative - Theileria parva Length = 124 Score = 33.1 bits (72), Expect = 2.9 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = +2 Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217 +G + + + K+PNSA RK ++L KN KK+ A++P Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP 65 >UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; Mesorhizobium sp. BNC1|Rep: Putative uncharacterized protein - Mesorhizobium sp. (strain BNC1) Length = 338 Score = 32.3 bits (70), Expect = 5.0 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = -3 Query: 192 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97 P + R+H ++ E+ C + P +S T+PFA Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271 >UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_29, whole genome shotgun sequence - Paramecium tetraurelia Length = 107 Score = 31.9 bits (69), Expect = 6.6 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 5 HRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 178 H+R Q W K+F K + T+ + G H KG+++ K G + N + + +++ Sbjct: 30 HKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEKEKIE 89 Query: 179 LIK 187 L++ Sbjct: 90 LVQ 92 >UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; Pezizomycotina|Rep: Putative uncharacterized protein - Chaetomium globosum (Soil fungus) Length = 507 Score = 31.5 bits (68), Expect = 8.8 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +2 Query: 35 EFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 214 +F+ G W N F A G + E + E K+PN++ + + + + +G TAF Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289 Query: 215 PRDGCLNHIEEND 253 CLN N+ Sbjct: 290 APIMCLNQAYYNE 302 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 477,981,375 Number of Sequences: 1657284 Number of extensions: 9339602 Number of successful extensions: 21597 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 20910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21586 length of database: 575,637,011 effective HSP length: 93 effective length of database: 421,509,599 effective search space used: 23604537544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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