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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0870.Seq
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu...   164   9e-40
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul...   146   2e-34
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4...   141   7e-33
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu...   113   2e-24
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa...   109   2e-23
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ...    71   9e-12
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce...    67   1e-10
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze...    64   1e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr...    58   1e-07
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full...    56   3e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;...    54   1e-06
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=...    54   1e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|...    49   4e-05
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria...    49   4e-05
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|...    49   5e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso...    48   9e-05
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul...    48   1e-04
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar...    47   2e-04
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ...    47   2e-04
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ...    43   0.003
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria...    43   0.003
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re...    42   0.006
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria...    41   0.011
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ...    41   0.014
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D...    40   0.025
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit...    40   0.025
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n...    38   0.13 
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap...    37   0.23 
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.54 
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=...    35   0.71 
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=...    35   0.71 
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul...    35   0.71 
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B...    35   0.94 
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ...    35   0.94 
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria...    34   1.6  
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T...    33   2.9  
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ...    32   5.0  
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh...    32   6.6  
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ...    31   8.8  

>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
           organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
           (Human)
          Length = 143

 Score =  164 bits (398), Expect = 9e-40
 Identities = 73/85 (85%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 181
           +HRR+Q+W DK++KKAH+GT  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL
Sbjct: 15  SHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74

Query: 182 IKNGKKVTAFVPRDGCLNHIEENDE 256
           IKNGKK+TAFVP DGCLN IEENDE
Sbjct: 75  IKNGKKITAFVPNDGCLNFIEENDE 99



 Score = 67.3 bits (157), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 34/39 (87%)
 Frame = +1

Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
           VLVAGFGRKGHAVGDIPGVRFKVVKVANVSL    K K+
Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKK 138


>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
           organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 145

 Score =  146 bits (354), Expect = 2e-34
 Identities = 63/84 (75%), Positives = 75/84 (89%)
 Frame = +2

Query: 5   HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184
           HRR  RWA+  +KK  +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLI
Sbjct: 18  HRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLI 77

Query: 185 KNGKKVTAFVPRDGCLNHIEENDE 256
           KNGKKVTAFVP DGCLN ++ENDE
Sbjct: 78  KNGKKVTAFVPNDGCLNFVDENDE 101



 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +1

Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
           VL+AGFGRKG A GDIPGVRFKVVKV+ VSL    K K+
Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKK 140


>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
           Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
           Oryza sativa (Rice)
          Length = 301

 Score =  141 bits (341), Expect = 7e-33
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +2

Query: 5   HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 184
           HRR QRWADK +KK+H G +WK  PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+
Sbjct: 87  HRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLV 145

Query: 185 KNGKKVTAFVPRDGCLNHIEEN 250
           KNGKK+ AFVP DGCLN I+EN
Sbjct: 146 KNGKKIAAFVPNDGCLNFIKEN 167


>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
           organisms|Rep: 30S ribosomal protein S12P - Uncultured
           methanogenic archaeon RC-I
          Length = 142

 Score =  113 bits (271), Expect = 2e-24
 Identities = 50/83 (60%), Positives = 66/83 (79%)
 Frame = +2

Query: 8   RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
           R+  RW+D+++ +  +    KA+P  GA  AKGIVLEKVGVEAKQPNSAIRKC+R+QLIK
Sbjct: 15  RKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIK 74

Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256
           NG+++TAF P DG +N I+E+DE
Sbjct: 75  NGRQITAFCPGDGAINFIDEHDE 97



 Score = 38.7 bits (86), Expect = 0.058
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +1

Query: 274 GRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
           GR G + GDIPGVRF+V KV +VSL      KR
Sbjct: 105 GRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKR 137


>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
           Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
           aerophilum
          Length = 147

 Score =  109 bits (263), Expect = 2e-23
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = +2

Query: 8   RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
           R++ RW D  +K+  +G   K +P  GA  A+GIVLEKVGVEA++PN+A+RKCVRVQL+K
Sbjct: 20  RQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVK 79

Query: 188 NGKKVTAFVPRDGCLNHIEENDE 256
           NGK VTAFVP DG LN+I E+DE
Sbjct: 80  NGKVVTAFVPLDGSLNYINEHDE 102



 Score = 39.5 bits (88), Expect = 0.033
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348
           G +G ++GDIPGVRFKV+KV  VSL
Sbjct: 110 GPEGRSLGDIPGVRFKVIKVNGVSL 134


>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 102

 Score = 71.3 bits (167), Expect = 9e-12
 Identities = 33/53 (62%), Positives = 39/53 (73%)
 Frame = -3

Query: 255 SSFSSMWFRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97
           SSFSS  F+QPS GT AVTF PFL++ T TH  +AE GCL S P FS+T+P A
Sbjct: 50  SSFSSTKFKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102



 Score = 42.7 bits (96), Expect = 0.004
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = -1

Query: 368 FLFVESERDTLATFTTLKRTPGMSPTA*PLRPNPATSTRRF 246
           F F ++ ++T  T TTL  TPG+SP A PL P PA  T  F
Sbjct: 12  FSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSF 52


>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
           cellular organisms|Rep: Protein splicing (Intein) site -
           Caldivirga maquilingensis IC-167
          Length = 661

 Score = 67.3 bits (157), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = +2

Query: 8   RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 187
           R++ RW+D ++KK  +G   K +P  GA  A+GIVLEKVGVEA++PN+A+RKCV    + 
Sbjct: 20  RQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLI 79

Query: 188 N 190
           N
Sbjct: 80  N 80



 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 24/31 (77%), Positives = 25/31 (80%)
 Frame = +2

Query: 164 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256
           CVRVQL KNGK VTAFVP DG LN I E+DE
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDE 616



 Score = 37.9 bits (84), Expect = 0.10
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +1

Query: 274 GRKGHAVGDIPGVRFKVVKVANVSL 348
           G +G A GD+PGVRFKV KV  VSL
Sbjct: 624 GPEGRAYGDLPGVRFKVTKVNGVSL 648


>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
           mays|Rep: Putative 40S ribosomal protein - Zea mays
           (Maize)
          Length = 309

 Score = 64.1 bits (149), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +1

Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372
           VL+AGFGRKGHAVGDIPGVRFKVVKV+ VSL    K K+
Sbjct: 226 VLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKK 264


>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
           ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to mitochondrial ribosomal protein
           S12 - Nasonia vitripennis
          Length = 173

 Score = 57.6 bits (133), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 74  NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           NPF GA  AKG+VL+ +  + K+PNSA RKCV V+L  NGK++TA++P  G
Sbjct: 83  NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132


>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
           full-length enriched library, clone:A330001L23
           product:hypothetical protein, full insert sequence; n=8;
           Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
           full-length enriched library, clone:A330001L23
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 154

 Score = 56.4 bits (130), Expect = 3e-07
 Identities = 30/71 (42%), Positives = 39/71 (54%)
 Frame = -2

Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38
           G E    L VLNEL+ DA  DGR+ L      F + ++LC+R T +R+ L     VGFL 
Sbjct: 25  GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84

Query: 37  FFVRPSLFTTV 5
            FV P L  +V
Sbjct: 85  LFVMPLLVPSV 95


>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 143

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 38/71 (53%)
 Frame = -2

Query: 217 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLE 38
           G E    L VLNEL+ DA  DGR+ L      F + ++LC+R   +R+ L     VGFL 
Sbjct: 56  GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115

Query: 37  FFVRPSLFTTV 5
            FV P L  +V
Sbjct: 116 LFVMPLLVPSV 126



 Score = 40.3 bits (90), Expect = 0.019
 Identities = 18/40 (45%), Positives = 30/40 (75%)
 Frame = -3

Query: 387 MILVAPFSLCRERERHVGYFYHLKTNSGNVTDGVTFTTES 268
           M L+A F L + ++R++GYF HLK +S ++T  +TF+T+S
Sbjct: 1   MFLLAQFDL-QSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39


>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
           Coelomata|Rep: Mitochondrial ribosomal protein S12 -
           Bombyx mori (Silk moth)
          Length = 111

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 50/83 (60%)
 Frame = +2

Query: 50  HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229
           H+  +   NP  G   AKG+VL+ V  + K+PNSA RKCV V+L  NGK++ A++P  G 
Sbjct: 13  HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69

Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298
            ++++E++    R   +K  P V
Sbjct: 70  GHNLQEHNVVLVRVGRLKDCPGV 92


>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
           Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
           melanogaster (Fruit fly)
          Length = 154

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 37/59 (62%)
 Frame = +2

Query: 50  HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G
Sbjct: 56  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113


>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
           precursor; n=7; Coelomata|Rep: 40S ribosomal protein
           S12, mitochondrial precursor - Drosophila melanogaster
           (Fruit fly)
          Length = 140

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 37/59 (62%)
 Frame = +2

Query: 50  HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L   GK++ A++P  G
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99


>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
           Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
           (African clawed frog)
          Length = 150

 Score = 48.8 bits (111), Expect = 5e-05
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = +2

Query: 77  PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           P  G    KG+VL+ +  + K+PNSA RKC RV+L  NGK+V  F+P +G
Sbjct: 62  PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG 110


>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
           protein S12, mitochondrial precursor (MT-RPS12)
           (Technical knockout locus protein); n=2; Coelomata|Rep:
           PREDICTED: similar to 40S ribosomal protein S12,
           mitochondrial precursor (MT-RPS12) (Technical knockout
           locus protein) - Tribolium castaneum
          Length = 156

 Score = 48.0 bits (109), Expect = 9e-05
 Identities = 29/83 (34%), Positives = 48/83 (57%)
 Frame = +2

Query: 50  HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 229
           H+  +    P  G    KG+VL+ +  + K+PNSA RKCV V+L  NGK++ A++P  G 
Sbjct: 60  HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116

Query: 230 LNHIEENDEY*WRDSVVKVTPSV 298
            ++++E++    R   V+  P V
Sbjct: 117 GHNLQEHNIVLCRVGRVQDCPGV 139


>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
           organisms|Rep: 30S ribosomal protein S12 - Aquifex
           aeolicus
          Length = 128

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 29/81 (35%), Positives = 45/81 (55%)
 Frame = +2

Query: 62  KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241
           K KA    G    +G+ +    V  K+PNSA+RK  RV+L  NG +VTA++P +G  +++
Sbjct: 18  KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74

Query: 242 EENDEY*WRDSVVKVTPSVTF 304
           +E+     R   VK  P V +
Sbjct: 75  QEHSIVLVRGGRVKDLPGVRY 95


>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
           Saccharomycetales|Rep: 30S ribosomal protein S12 -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 183

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 24/68 (35%), Positives = 44/68 (64%)
 Frame = +2

Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVV 280
           +G++L  + ++ K+PNSA+RKC RV+L  NGK ++A +P +G  ++++E+     R   V
Sbjct: 90  RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRGGRV 146

Query: 281 KVTPSVTF 304
           +  P V +
Sbjct: 147 QDVPGVKY 154


>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 128

 Score = 46.8 bits (106), Expect = 2e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +1

Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVK 330
           VL++GFG KGHAVGDI GVRF+VVK
Sbjct: 69  VLISGFGHKGHAVGDIRGVRFEVVK 93


>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 157

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 24/57 (42%), Positives = 36/57 (63%)
 Frame = +2

Query: 86  GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 256
           G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++P  G  ++++E+ +
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQ 125


>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
           precursor; n=13; Deuterostomia|Rep: 28S ribosomal
           protein S12, mitochondrial precursor - Homo sapiens
           (Human)
          Length = 138

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +2

Query: 68  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           K  P  G    KG+VL     + K+PNSA RKC RV+L   G++   F+P +G
Sbjct: 48  KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99


>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
           Em1-tg19B - Euplotes aediculatus
          Length = 139

 Score = 41.9 bits (94), Expect = 0.006
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = -2

Query: 214 DECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFLEF 35
           +E  HFL VL EL++DA ++G V LL F  +   DDA C    +E + L  R H  F   
Sbjct: 70  NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVS 127

Query: 34  FVRPSLFTTV 5
            + PSL ++V
Sbjct: 128 CIVPSLLSSV 137


>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
           precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
           mitochondrial precursor - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 153

 Score = 41.1 bits (92), Expect = 0.011
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           KG+VL  + ++ K+PNSA RK  RV+L  NG  V+A++P +G
Sbjct: 59  KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99


>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
           n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
           protein S12 - Chlamydomonas reinhardtii
          Length = 133

 Score = 40.7 bits (91), Expect = 0.014
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = +2

Query: 62  KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 241
           K K+         +GI L    V  K+PNSA+RK  RV+L   G +VTA++P  G  +++
Sbjct: 18  KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74

Query: 242 EENDEY*WRDSVVKVTPSVTF 304
           +E+     R   VK  P V +
Sbjct: 75  QEHAVVLVRGGRVKDLPGVRY 95


>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
           Dikarya|Rep: Ribosomal protein S12, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 176

 Score = 39.9 bits (89), Expect = 0.025
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +2

Query: 47  AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
           A   TK K++     G    K +  +    + ++PNSA+RK  RV+L  NG+  TA++P 
Sbjct: 62  ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120

Query: 221 DGCLNHIEENDEY*WRDSVVKVTPSVTF 304
           +G  ++++E+     R    K  P V +
Sbjct: 121 EG--HNLQEHSVVLVRGGGAKDLPGVRY 146


>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
           S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
           protein subunit S12 - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 146

 Score = 39.9 bits (89), Expect = 0.025
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +2

Query: 86  GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           G+   +G+      V+ K+PNSA+RK  RV+L   G+ VTA++P  G
Sbjct: 47  GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92


>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
           Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
           Toxoplasma gondii
          Length = 121

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +2

Query: 41  KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
           K + +  K ++  F      KG+ ++      K+PNSA+RK  +++L KN K++ A++P 
Sbjct: 9   KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67

Query: 221 DG 226
           +G
Sbjct: 68  EG 69


>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 208

 Score = 36.7 bits (81), Expect = 0.23
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +2

Query: 41  KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 220
           +K     K  +    G    KG+ L+    + K+PNS  RK  R++L  NG  VT ++P 
Sbjct: 90  RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148

Query: 221 DG 226
           +G
Sbjct: 149 EG 150


>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 110

 Score = 35.5 bits (78), Expect = 0.54
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +2

Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217
           KG+ ++    + K+PNSA RKC  ++L  NGK ++A++P
Sbjct: 36  KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP 73


>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
           Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
           Chondrus crispus (Carragheen)
          Length = 127

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 25/82 (30%), Positives = 39/82 (47%)
 Frame = +2

Query: 59  TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 238
           TK K+         KGI ++      K+PNSA RK  +V L  NGK +  ++  +G  + 
Sbjct: 17  TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73

Query: 239 IEENDEY*WRDSVVKVTPSVTF 304
           ++E+     R   VK  P V +
Sbjct: 74  LQEHSLVLVRGGRVKDLPGVQY 95


>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
           n=1255; cellular organisms|Rep: Mitochondrial ribosomal
           protein S12 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 125

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 22/67 (32%), Positives = 36/67 (53%)
 Frame = +2

Query: 104 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY*WRDSVVK 283
           G+ L       K+PNSA+RK  +V+L  N   + A++P +G  ++++E+     R   VK
Sbjct: 32  GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGRVK 88

Query: 284 VTPSVTF 304
             P V F
Sbjct: 89  DLPGVKF 95


>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
           organisms|Rep: 30S ribosomal protein S12 - Rickettsia
           conorii
          Length = 129

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = +2

Query: 68  KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 247
           ++NPF       G+ L    V  K+PNSA+RK   V+L  N + V A++P  G  + ++E
Sbjct: 25  ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76

Query: 248 NDEY*WRDSVVKVTPSVTF 304
           +D    R   V   P V +
Sbjct: 77  HDRVLVRGGQVPDLPGVKY 95


>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
           Babesia bovis|Rep: Ribosomal protein S12, putative -
           Babesia bovis
          Length = 294

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 86  GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           G    KG+ +    V  ++PNS +RK  RV+L   G+ VT  VP +G
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG 172


>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 141

 Score = 34.7 bits (76), Expect = 0.94
 Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +2

Query: 119 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226
           +VG+ + K+PNS  RK  RV+L   GK +TA++P +G
Sbjct: 49  RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84


>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
           precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
           S12, mitochondrial precursor - Oenothera hookeri
           (Hooker's evening primrose)
          Length = 188

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +2

Query: 83  GGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEY* 262
           G     +G+ L       K+PNSA+ K  +V+L  N   V A++P +G  ++++E+    
Sbjct: 88  GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144

Query: 263 WRDSVVKVTPSVTF 304
            R   VK  P V F
Sbjct: 145 VRGGRVKDLPGVKF 158


>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
           Theileria parva|Rep: Ribosomal protein S12, putative -
           Theileria parva
          Length = 124

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +2

Query: 101 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 217
           +G +   + +  K+PNSA RK   ++L KN KK+ A++P
Sbjct: 28  EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP 65


>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
           Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
           protein - Mesorhizobium sp. (strain BNC1)
          Length = 338

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 192 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 97
           P   +  R+H ++ E+ C  + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271


>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_29,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 107

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 5   HRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 178
           H+R Q   W  K+F K  + T+ +    G   H KG+++ K G    + N  + +  +++
Sbjct: 30  HKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEKEKIE 89

Query: 179 LIK 187
           L++
Sbjct: 90  LVQ 92


>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Chaetomium globosum (Soil fungus)
          Length = 507

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +2

Query: 35  EFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 214
           +F+    G  W  N F  A    G + E +  E K+PN++ +  + + +  +G   TAF 
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289

Query: 215 PRDGCLNHIEEND 253
               CLN    N+
Sbjct: 290 APIMCLNQAYYNE 302


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,981,375
Number of Sequences: 1657284
Number of extensions: 9339602
Number of successful extensions: 21597
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 20910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21586
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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