BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0870.Seq (449 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 23 1.3 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.8 AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 22 3.1 AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 22 3.1 >EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive peptide receptor 1 protein. Length = 374 Score = 23.0 bits (47), Expect = 1.3 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +1 Query: 76 PFRWCISRKGHRPRES 123 PF+W +K R RES Sbjct: 323 PFKWLFKKKKRRNRES 338 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 22.6 bits (46), Expect = 1.8 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +1 Query: 283 GHAVGDIPGVR 315 G AVGD+PG+R Sbjct: 62 GTAVGDVPGLR 72 >AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain transcription factor Maxillopediaprotein. Length = 523 Score = 21.8 bits (44), Expect = 3.1 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = -3 Query: 315 TNSGNVTDGVTFTTESRH*YSSFSSMWFRQPSRGTNAVT 199 TN+ +T + TES Y+SF + + S+ A T Sbjct: 458 TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPT 496 >AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia ortholog protein. Length = 471 Score = 21.8 bits (44), Expect = 3.1 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = -3 Query: 315 TNSGNVTDGVTFTTESRH*YSSFSSMWFRQPSRGTNAVT 199 TN+ +T + TES Y+SF + + S+ A T Sbjct: 406 TNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPT 444 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 110,073 Number of Sequences: 336 Number of extensions: 2196 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 10195961 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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