BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0870.Seq (449 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 175 2e-44 AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 175 2e-44 M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 49 3e-06 BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 49 3e-06 AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 49 3e-06 AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 49 3e-06 AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 49 3e-06 AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 46 2e-05 AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 28 5.0 DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 6.7 BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p pro... 28 6.7 AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 6.7 AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p pro... 28 6.7 AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 6.7 AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 6.7 AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC... 28 6.7 AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB... 28 6.7 AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA... 28 6.7 AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypept... 28 6.7 AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p pro... 27 8.8 AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot... 27 8.8 AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p... 27 8.8 >AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p protein. Length = 143 Score = 175 bits (426), Expect = 2e-44 Identities = 77/85 (90%), Positives = 84/85 (98%) Frame = +2 Query: 2 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 181 NHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL Sbjct: 15 NHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74 Query: 182 IKNGKKVTAFVPRDGCLNHIEENDE 256 IKNGKK+TAFVPRDG LN+IEENDE Sbjct: 75 IKNGKKITAFVPRDGSLNYIEENDE 99 Score = 68.1 bits (159), Expect = 5e-12 Identities = 33/39 (84%), Positives = 34/39 (87%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSL K K+ Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 138 Score = 30.3 bits (65), Expect = 1.2 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 348 LALYKEKKERPRS 386 LALYKEKKERPRS Sbjct: 131 LALYKEKKERPRS 143 >AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA protein. Length = 143 Score = 175 bits (426), Expect = 2e-44 Identities = 77/85 (90%), Positives = 84/85 (98%) Frame = +2 Query: 2 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 181 NHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL Sbjct: 15 NHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74 Query: 182 IKNGKKVTAFVPRDGCLNHIEENDE 256 IKNGKK+TAFVPRDG LN+IEENDE Sbjct: 75 IKNGKKITAFVPRDGSLNYIEENDE 99 Score = 68.1 bits (159), Expect = 5e-12 Identities = 33/39 (84%), Positives = 34/39 (87%) Frame = +1 Query: 256 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLSLSTKRKR 372 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSL K K+ Sbjct: 100 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 138 Score = 30.3 bits (65), Expect = 1.2 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 Query: 348 LALYKEKKERPRS 386 LALYKEKKERPRS Sbjct: 131 LALYKEKKERPRS 143 >M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.melanogaster tko (technical knockout) locus mRNA encoding tko gene product,complete cds. ). Length = 140 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99 >BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p protein. Length = 140 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99 >AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11.1,FBgn0003714;tko protein. Length = 140 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99 >AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11.1,FBgn0003714;tko protein. Length = 154 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113 >AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB protein. Length = 140 Score = 49.2 bits (112), Expect = 3e-06 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99 >AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical knockout protein protein. Length = 140 Score = 46.4 bits (105), Expect = 2e-05 Identities = 24/59 (40%), Positives = 36/59 (61%) Frame = +2 Query: 50 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 226 H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+ GK++ A++P G Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIPGIG 99 >AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA protein. Length = 358 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = +2 Query: 77 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 187 PFG + +VLE+ G K Q IRKCV + +K Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161 >DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein. Length = 1228 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 105 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 4 PF PP VP++A L L R +RRW Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943 >BT016082-1|AAV36967.1| 568|Drosophila melanogaster LD47465p protein. Length = 568 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 407 EMAHRVGEFFHAKTNAVNIYTDGI 430 >AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein. Length = 1241 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 105 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 4 PF PP VP++A L L R +RRW Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950 >AY070520-1|AAL47991.1| 507|Drosophila melanogaster GH23534p protein. Length = 507 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 346 EMAHRVGEFFHAKTNAVNIYTDGI 369 >AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein. Length = 1241 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 105 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 4 PF PP VP++A L L R +RRW Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950 >AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA protein. Length = 1241 Score = 27.9 bits (59), Expect = 6.7 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 105 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 4 PF PP VP++A L L R +RRW Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950 >AE014297-2300|AAX52959.1| 568|Drosophila melanogaster CG5201-PC, isoform C protein. Length = 568 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 407 EMAHRVGEFFHAKTNAVNIYTDGI 430 >AE014297-2299|AAF55383.1| 568|Drosophila melanogaster CG5201-PB, isoform B protein. Length = 568 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 407 EMAHRVGEFFHAKTNAVNIYTDGI 430 >AE014297-2298|AAN13728.1| 568|Drosophila melanogaster CG5201-PA, isoform A protein. Length = 568 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 407 EMAHRVGEFFHAKTNAVNIYTDGI 430 >AB004232-1|BAA22841.1| 568|Drosophila melanogaster DAD polypeptide protein. Length = 568 Score = 27.9 bits (59), Expect = 6.7 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 354 ERERHVGYFYHLKTNSGNV-TDGV 286 E VG F+H KTN+ N+ TDG+ Sbjct: 407 EMAHRVGEFFHAKTNAVNIYTDGI 430 >AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p protein. Length = 667 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 58 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 153 YE+E P W + HR R+++C +LC Sbjct: 267 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 298 >AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown protein. Length = 1640 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 58 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 153 YE+E P W + HR R+++C +LC Sbjct: 1240 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1271 >AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA protein. Length = 1773 Score = 27.5 bits (58), Expect = 8.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +1 Query: 58 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 153 YE+E P W + HR R+++C +LC Sbjct: 1373 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1404 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,711,301 Number of Sequences: 53049 Number of extensions: 444900 Number of successful extensions: 1523 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1523 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1455824790 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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