BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0869.Seq (499 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 27 0.094 AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 3.5 AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 3.5 AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 3.5 EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 4.7 AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 6.2 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.1 AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 8.1 AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 8.1 >AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine kinase Torso-likeprotein protein. Length = 803 Score = 27.1 bits (57), Expect = 0.094 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = -2 Query: 114 IVDLKKKTHNVHNIWS 67 I+DL ++T+NVH +WS Sbjct: 280 IIDLSQQTYNVHLMWS 295 >AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor candidate 53 protein. Length = 659 Score = 21.8 bits (44), Expect = 3.5 Identities = 10/43 (23%), Positives = 22/43 (51%) Frame = +2 Query: 53 LKYTSDHILWTLCVFFFKSTIG*GNEFF*HLLNALKY*LFYII 181 L + ++ + +FFF + + G +F LLN + + ++I Sbjct: 529 LMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVI 571 >AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor candidate 24 protein. Length = 384 Score = 21.8 bits (44), Expect = 3.5 Identities = 10/43 (23%), Positives = 22/43 (51%) Frame = +2 Query: 53 LKYTSDHILWTLCVFFFKSTIG*GNEFF*HLLNALKY*LFYII 181 L + ++ + +FFF + + G +F LLN + + ++I Sbjct: 254 LMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVI 296 >AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. Length = 456 Score = 21.8 bits (44), Expect = 3.5 Identities = 5/14 (35%), Positives = 12/14 (85%) Frame = +2 Query: 38 FHSNHLKYTSDHIL 79 +H+NH+ T++H++ Sbjct: 52 YHANHVNPTANHVM 65 >EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 protein. Length = 475 Score = 21.4 bits (43), Expect = 4.7 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 Query: 38 FHSNHLKYTSDHILWTLCVFFFKSTIG*GNE 130 + N+ K+T + I TLC S +G G++ Sbjct: 32 YRLNNGKFTVEDIDPTLCTHLIYSFVGLGDD 62 >AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor candidate 19 protein. Length = 355 Score = 21.0 bits (42), Expect = 6.2 Identities = 5/11 (45%), Positives = 10/11 (90%) Frame = +2 Query: 71 HILWTLCVFFF 103 H+L+ LC+++F Sbjct: 126 HLLFLLCIYYF 136 Score = 21.0 bits (42), Expect = 6.2 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +2 Query: 53 LKYTSDHILWTLCVFFFKS 109 L Y + H+L+ C+++F S Sbjct: 199 LDYFTLHLLFLPCIYYFYS 217 Score = 21.0 bits (42), Expect = 6.2 Identities = 5/11 (45%), Positives = 10/11 (90%) Frame = +2 Query: 71 HILWTLCVFFF 103 H+L+ LC+++F Sbjct: 278 HLLFLLCIYYF 288 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 20.6 bits (41), Expect = 8.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 141 CQKNSFP*PIVDLKKKT 91 C+ + FP P+V K+ T Sbjct: 720 CKADGFPRPVVTWKRAT 736 >AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor candidate 62 protein. Length = 320 Score = 20.6 bits (41), Expect = 8.1 Identities = 6/14 (42%), Positives = 8/14 (57%) Frame = +1 Query: 229 PWSSMNFTHRVHNY 270 P F HR+H+Y Sbjct: 16 PTKEKRFPHRIHSY 29 >AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor candidate 37 protein. Length = 331 Score = 20.6 bits (41), Expect = 8.1 Identities = 6/14 (42%), Positives = 8/14 (57%) Frame = +1 Query: 229 PWSSMNFTHRVHNY 270 P F HR+H+Y Sbjct: 16 PTKEKRFPHRIHSY 29 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 98,400 Number of Sequences: 336 Number of extensions: 1950 Number of successful extensions: 13 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 11735024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -