Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0869.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.094
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.1 bits (57), Expect = 0.094
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 114 IVDLKKKTHNVHNIWS 67
           I+DL ++T+NVH +WS
Sbjct: 280 IIDLSQQTYNVHLMWS 295


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +2

Query: 53  LKYTSDHILWTLCVFFFKSTIG*GNEFF*HLLNALKY*LFYII 181
           L +    ++  + +FFF + +  G  +F  LLN +   + ++I
Sbjct: 529 LMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVI 571


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = +2

Query: 53  LKYTSDHILWTLCVFFFKSTIG*GNEFF*HLLNALKY*LFYII 181
           L +    ++  + +FFF + +  G  +F  LLN +   + ++I
Sbjct: 254 LMFGVSFVVIVITIFFFTANVQAGELYFMSLLNPILSNVTFVI 296


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax
          protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 38 FHSNHLKYTSDHIL 79
          +H+NH+  T++H++
Sbjct: 52 YHANHVNPTANHVM 65


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 38  FHSNHLKYTSDHILWTLCVFFFKSTIG*GNE 130
           +  N+ K+T + I  TLC     S +G G++
Sbjct: 32  YRLNNGKFTVEDIDPTLCTHLIYSFVGLGDD 62


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 71  HILWTLCVFFF 103
           H+L+ LC+++F
Sbjct: 126 HLLFLLCIYYF 136



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 53  LKYTSDHILWTLCVFFFKS 109
           L Y + H+L+  C+++F S
Sbjct: 199 LDYFTLHLLFLPCIYYFYS 217



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +2

Query: 71  HILWTLCVFFF 103
           H+L+ LC+++F
Sbjct: 278 HLLFLLCIYYF 288


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 141 CQKNSFP*PIVDLKKKT 91
           C+ + FP P+V  K+ T
Sbjct: 720 CKADGFPRPVVTWKRAT 736


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 229 PWSSMNFTHRVHNY 270
           P     F HR+H+Y
Sbjct: 16  PTKEKRFPHRIHSY 29


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 229 PWSSMNFTHRVHNY 270
           P     F HR+H+Y
Sbjct: 16  PTKEKRFPHRIHSY 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,400
Number of Sequences: 336
Number of extensions: 1950
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)