BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0869.Seq (499 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 27 7.6 AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 27 7.6 AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 27 10.0 AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 27 10.0 >Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical protein F54F11.2 protein. Length = 1589 Score = 27.1 bits (57), Expect = 7.6 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +3 Query: 96 FFSNLQSVKGMNFFDIY*MLLNINYFTLYKNI 191 ++S L NF+DIY L+ N F Y + Sbjct: 1320 YYSTLVIADSDNFYDIYDKLIKFNIFVQYNQL 1351 >AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical protein Y51A2D.4 protein. Length = 606 Score = 27.1 bits (57), Expect = 7.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -3 Query: 233 QGNPVHNPKMSMFPYILV*CKII 165 Q P H PK+ +F YIL +I Sbjct: 12 QDKPAHTPKLGLFVYILAAASVI 34 >AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoformb protein. Length = 1420 Score = 26.6 bits (56), Expect = 10.0 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 Query: 44 SNHLKYTSDHILWTLCVFFFKST 112 S H +YT ++ILW + +F +T Sbjct: 213 SEHTRYTFENILWLILKSYFSTT 235 >AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog protein 1, isoforma protein. Length = 1418 Score = 26.6 bits (56), Expect = 10.0 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 Query: 44 SNHLKYTSDHILWTLCVFFFKST 112 S H +YT ++ILW + +F +T Sbjct: 213 SEHTRYTFENILWLILKSYFSTT 235 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,166,978 Number of Sequences: 27780 Number of extensions: 159292 Number of successful extensions: 231 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 231 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 945973702 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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