Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0868.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    29   2.6  
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    29   2.6  
BT029037-1|ABJ16970.1|  443|Drosophila melanogaster IP03356p pro...    29   3.5  
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro...    29   3.5  
AE014134-1287|AAS64651.1|  447|Drosophila melanogaster CG13788-P...    29   3.5  
AE014134-1286|AAS64650.1|  440|Drosophila melanogaster CG13788-P...    29   3.5  
AE014134-1285|AAS64649.1|  470|Drosophila melanogaster CG13788-P...    29   3.5  
AE014134-1284|AAS64648.1|  443|Drosophila melanogaster CG13788-P...    29   3.5  
AE014134-1283|AAF52520.2|  452|Drosophila melanogaster CG13788-P...    29   3.5  

>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
           centrosomal protein protein.
          Length = 2726

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 219 NPSPQFSDISLRAKDEAGDILTEHYLS---EKGHLSAPLNKVTNAEIAEEM 76
           NP  + S+IS+    E+ D L  H+L+   E+G  S+   ++T  +  EE+
Sbjct: 580 NPGQRISEISMDLISESDDDLDRHFLTDNEERGSRSSKERQLTQLQTNEEL 630


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
           isoform B protein.
          Length = 2897

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 219 NPSPQFSDISLRAKDEAGDILTEHYLS---EKGHLSAPLNKVTNAEIAEEM 76
           NP  + S+IS+    E+ D L  H+L+   E+G  S+   ++T  +  EE+
Sbjct: 751 NPGQRISEISMDLISESDDDLDRHFLTDNEERGSRSSKERQLTQLQTNEEL 801


>BT029037-1|ABJ16970.1|  443|Drosophila melanogaster IP03356p
           protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 315 FKTVEFVTFFSCQMILYLIAIISI 338


>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p protein.
          Length = 1371

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -2

Query: 216  PSPQFSDISLRAKDEAGDILTEHYLSEKGHLSAPLNKVTNAEIAEEMAYCYARMKSDILE 37
            P+PQ + ISL+        +TE  +S +G  ++P +  T +  + E    Y    SD+++
Sbjct: 946  PAPQPTQISLQPAQAT--YMTETVMSRQGTAASPPDTTTCSPRSPERPSSYRSSGSDMVQ 1003

Query: 36   C 34
            C
Sbjct: 1004 C 1004


>AE014134-1287|AAS64651.1|  447|Drosophila melanogaster CG13788-PE,
           isoform E protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 319 FKTVEFVTFFSCQMILYLIAIISI 342


>AE014134-1286|AAS64650.1|  440|Drosophila melanogaster CG13788-PD,
           isoform D protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 312 FKTVEFVTFFSCQMILYLIAIISI 335


>AE014134-1285|AAS64649.1|  470|Drosophila melanogaster CG13788-PC,
           isoform C protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 342 FKTVEFVTFFSCQMILYLIAIISI 365


>AE014134-1284|AAS64648.1|  443|Drosophila melanogaster CG13788-PB,
           isoform B protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 315 FKTVEFVTFFSCQMILYLIAIISI 338


>AE014134-1283|AAF52520.2|  452|Drosophila melanogaster CG13788-PA,
           isoform A protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 28  FKTFQYITFHSCVAICHLFSYLSI 99
           FKT +++TF SC  I +L + +SI
Sbjct: 324 FKTVEFVTFFSCQMILYLIAIISI 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,400,423
Number of Sequences: 53049
Number of extensions: 427058
Number of successful extensions: 980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)