Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0866.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    26   0.16 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.29 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.29 
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    25   0.38 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.38 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.50 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.7  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   2.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   4.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   4.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.1  

>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 38  HPDAPSTGAAQSKRINRAR*FNLKKKTQNNINNVHTIPKKEYI 166
           HPD+PSTG    +++        K K  NNI++ H   K++ +
Sbjct: 57  HPDSPSTGEQWMQKVVSFH----KLKLTNNISDKHGFLKEKAV 95


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 459 YSLXFTINYVVAKFHYLYQKLLYYYIDYIIETFATIGMLSC 337
           +S+   ++  V+ F  L+Q    YY+     +F T+ M+ C
Sbjct: 251 FSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTVPMIVC 291


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 459 YSLXFTINYVVAKFHYLYQKLLYYYIDYIIETFATIGMLSC 337
           +S+   ++  V+ F  L+Q    YY+     +F T+ M+ C
Sbjct: 251 FSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTVPMIVC 291


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 38  HPDAPSTGAAQSKRINRAR*FNLKKKTQNNINNVH 142
           HPD+PSTG    +++        K K  NNI++ H
Sbjct: 57  HPDSPSTGEQWMQKVVSFH----KLKLTNNISDKH 87


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 444 TINYVVAKFHYLYQKLLYYYIDYII 370
           T+ Y     H+ YQ LLY   D I+
Sbjct: 151 TVEYFQNYIHFFYQLLLYLITDMIL 175


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 9/41 (21%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 225 FVLLHIKYSK*HPYCFCDYVMYSF-LGIVCTLLMLFCVFFF 106
           +  LH+ +     Y +  +++++  L   C L++L C+++F
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYF 241



 Score = 24.6 bits (51), Expect = 0.50
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 171 YVMYSFLGIVCTLLMLFCVFFF 106
           Y  Y+F+     LL+L C+++F
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYF 261



 Score = 24.2 bits (50), Expect = 0.66
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 171 YVMYSFLGIVCTLLMLFCVFFF 106
           Y  Y+F+     LL L C+++F
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYF 136



 Score = 21.8 bits (44), Expect = 3.5
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -2

Query: 141 CTLLMLFCVFFF 106
           C L++L C+++F
Sbjct: 290 CALIILLCIYYF 301


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 175 AKTIGMSLRIFNMQQHKPQ 231
           A T+G   +++N+ QH PQ
Sbjct: 9   AMTLGQQNKMYNVIQHSPQ 27


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 189 PYCFCDYVMYSFLGI 145
           P   C +++YSF+G+
Sbjct: 47  PVDLCTHIVYSFIGV 61


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase
          like protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 28 RPEAPGRTEHWRGAIQANQ 84
          R +AP   EHW G + A +
Sbjct: 15 RFKAPELPEHWEGVLDATK 33


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 189 PYCFCDYVMYSFLGI 145
           PY  C +++YSF+G+
Sbjct: 50  PY-LCTHIIYSFVGL 63


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 253 SSLCFLDFVVCAVA 212
           SSL  LD+V C VA
Sbjct: 289 SSLLLLDYVSCVVA 302


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 253 SSLCFLDFVVCAVA 212
           SSL  LD+V C VA
Sbjct: 215 SSLLLLDYVSCVVA 228


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 186 YCFCDYVMYSF 154
           Y FCD + YSF
Sbjct: 206 YQFCDNLQYSF 216


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 186 YCFCDYVMYSF 154
           Y FCD + YSF
Sbjct: 197 YQFCDNLQYSF 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,034
Number of Sequences: 336
Number of extensions: 2386
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)