Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0866.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    27   0.47 
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    24   3.3  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    23   7.6  

>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 145 YSQKRIHYIVAKTIGMSLRIFNMQQHKPQSLRNKVMIYFS 264
           Y   R  Y   K   +S  +FN++ +K +SLRNK+   F+
Sbjct: 41  YFHDRGTYYNEKHDPLSAHLFNLEGYKWKSLRNKITPTFT 80


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 190 MSLRIFNMQQHKPQSLRNKVMIYFS 264
           +S  +FN++  K +SLRNK+   F+
Sbjct: 116 LSAHLFNLEGQKWRSLRNKLSPTFT 140


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 145 YSQKRIHYIVAKTIGMSLRIFNMQQHKPQSLRNKVMIYFS 264
           Y   R  Y   K   ++  +FN++  K ++LRNK+   F+
Sbjct: 102 YFHDRGTYYNEKHDPLTAHLFNLEGQKWRNLRNKMTPTFT 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,118
Number of Sequences: 2352
Number of extensions: 7993
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)