Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0814.Seq
         (415 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4FEY1 Cluster: Putative uncharacterized protein CpBV-H...    33   3.1  
UniRef50_Q31AH9 Cluster: Multidrug efflux transporter, MFS famil...    33   3.1  
UniRef50_Q4XHA0 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_Q6G122 Cluster: UDP-N-acetylmuramoylalanine--D-glutamat...    32   5.3  
UniRef50_UPI000155CB12 Cluster: PREDICTED: similar to PITPNM fam...    31   7.1  
UniRef50_O25443 Cluster: tRNA (guanine-N(7)-)-methyltransferase ...    31   7.1  
UniRef50_Q9BZ71 Cluster: Membrane-associated phosphatidylinosito...    31   7.1  
UniRef50_Q8F5L0 Cluster: Ankyrin repeat proteins; n=2; Leptospir...    31   9.3  
UniRef50_Q3VWE2 Cluster: K+-dependent Na+/Ca+ exchanger related-...    31   9.3  
UniRef50_A0E089 Cluster: Chromosome undetermined scaffold_71, wh...    31   9.3  

>UniRef50_Q4FEY1 Cluster: Putative uncharacterized protein
           CpBV-HP402; n=4; Bracovirus|Rep: Putative
           uncharacterized protein CpBV-HP402 - Cotesia plutellae
           polydnavirus
          Length = 836

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
 Frame = +1

Query: 1   ASRESVNVSQNNTYKQMAXISIHRPLTSRL--------LKLMEAVHTKELIIISDDA*QH 156
           A +  ++ S NN  K +A ISI RP  S L        LKL EA H+    ++ DD    
Sbjct: 232 AEQNHMSKSNNNLRKPIARISIKRPAQSELKAELDAKRLKLEEAAHSSN-AVVDDDQESR 290

Query: 157 GTVKALLRNFRVTEKEMAIKENQND 231
            TV      FR  ++ +    + N+
Sbjct: 291 ITVAPSKETFRDNQETLTDDFSNNN 315


>UniRef50_Q31AH9 Cluster: Multidrug efflux transporter, MFS
           family-like protein; n=5; Prochlorococcus marinus|Rep:
           Multidrug efflux transporter, MFS family-like protein -
           Prochlorococcus marinus (strain MIT 9312)
          Length = 409

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = -3

Query: 221 FSLIAISFSVTLKFLSNALTVPCCYASSLIIISSFVCTASISFKSLDV 78
           FSLI  SF+  L F+S+ L +P  Y  S  +I   + TAS    S DV
Sbjct: 297 FSLINFSFASFLLFISSYLNIPAFYLISFSLILVSLGTASFLPTSTDV 344


>UniRef50_Q4XHA0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 214

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
 Frame = +1

Query: 16  VNVSQNNTYKQMAXIS-IHRPLTSRLLKLMEAVHTKELIIISDDA*QHGTVKALLRNFRV 192
           +N S NN  K+   I  IH+ LT+  + ++E   + E +   +++ +      LL   ++
Sbjct: 110 LNDSINNMKKRDEVIDEIHKKLTTLKINVLELEKSNEQVK-KENSVEREKRDNLLIELKI 168

Query: 193 TEKEM-AIKENQNDTNKCVXSV 255
            +K++  I++N+N+ NKCV  +
Sbjct: 169 LKKKIHKIEKNKNELNKCVDDI 190


>UniRef50_Q6G122 Cluster: UDP-N-acetylmuramoylalanine--D-glutamate
           ligase; n=13; Alphaproteobacteria|Rep:
           UDP-N-acetylmuramoylalanine--D-glutamate ligase -
           Bartonella quintana (Rochalimaea quintana)
          Length = 466

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -3

Query: 218 SLIAISFSVTLKFLSNALTVP--CCYASSLIIISSFVCTASISFKSLDVRGLCMLXYAIC 45
           S    S S+TL+   +  TV   CC A   +++ S  C +   FK+ +VRG   + + + 
Sbjct: 403 SAFPFSMSLTLENAVHEATVDAMCCKAKEAVVLFSPACASYDQFKNYEVRGEAFVSFVMQ 462

Query: 44  L 42
           L
Sbjct: 463 L 463


>UniRef50_UPI000155CB12 Cluster: PREDICTED: similar to PITPNM family
           member 3; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to PITPNM family member 3 - Ornithorhynchus
           anatinus
          Length = 629

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 431 PREKWLRKRTQVKLRNV-TANHRAND 455


>UniRef50_O25443 Cluster: tRNA (guanine-N(7)-)-methyltransferase (EC
           2.1.1.33) (tRNA(m7G46)- methyltransferase); n=4;
           Helicobacter|Rep: tRNA (guanine-N(7)-)-methyltransferase
           (EC 2.1.1.33) (tRNA(m7G46)- methyltransferase) -
           Helicobacter pylori (Campylobacter pylori)
          Length = 393

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 1   ASRESVNVSQNNTYKQMAXISIHRPLTSRLLKLMEAVHTKELIIISDD 144
           + R  + +++NN  K    I IH P  ++ LK +E +  K L I+  D
Sbjct: 129 SGRHLIELAKNNPTKTCLGIEIHTPSIAQALKQIELLDLKNLHILQGD 176


>UniRef50_Q9BZ71 Cluster: Membrane-associated phosphatidylinositol
           transfer protein 3; n=24; Euteleostomi|Rep:
           Membrane-associated phosphatidylinositol transfer
           protein 3 - Homo sapiens (Human)
          Length = 974

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 616 PREKWLRKRTQVKLRNV-TANHRAND 640


>UniRef50_Q8F5L0 Cluster: Ankyrin repeat proteins; n=2; Leptospira
           interrogans|Rep: Ankyrin repeat proteins - Leptospira
           interrogans
          Length = 650

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 239 LLVSFWFSLIAISFSVTLKFLSNAL 165
           L V  WFS + ISFS  +KF SNAL
Sbjct: 36  LKVPLWFSALPISFSGGVKFKSNAL 60


>UniRef50_Q3VWE2 Cluster: K+-dependent Na+/Ca+ exchanger
           related-protein; n=1; Prosthecochloris aestuarii DSM
           271|Rep: K+-dependent Na+/Ca+ exchanger related-protein
           - Prosthecochloris aestuarii DSM 271
          Length = 334

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -3

Query: 260 YGTEXTHLLVSFWFSLIAISFSVTLKFL--SNALTVPCCYASSLIIISSFVCTASISFKS 87
           YGT     +VSF+  ++  S S++L  +  SN   +      S +I    +   SI  +S
Sbjct: 57  YGTSMPEFVVSFFAHVVEDSDSISLGNVIGSNITNIGLILGLSALIFPIHIAFQSIRNQS 116

Query: 86  LDVRGLCMLXYAICL 42
           L + G+ M+ Y + L
Sbjct: 117 LFLFGISMIVYLLAL 131


>UniRef50_A0E089 Cluster: Chromosome undetermined scaffold_71, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_71,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 997

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 157 GTVKALLRNFRVTEKEMAIKENQNDTNKCVXSVP*RQRXKQLERNQLAKRRK 312
           G + +    F     E+AIK N+N TN  +      +R K  + NQ+A RRK
Sbjct: 182 GKINSYYMKFMSQRIELAIKFNENTTNYSITQAV--KREKSSDLNQMAIRRK 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,304,095
Number of Sequences: 1657284
Number of extensions: 4607224
Number of successful extensions: 10866
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10861
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)