Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0814.Seq
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128584-1|AAI28585.1|  974|Homo sapiens PITPNM family member 3 ...    31   1.1  
BC128583-1|AAI28584.1|  974|Homo sapiens PITPNM family member 3 ...    31   1.1  
AL389994-1|CAB97544.1|  912|Homo sapiens hypothetical protein, s...    31   1.1  
AF334586-1|AAK01446.1|  974|Homo sapiens NIR1 protein.                 31   1.1  
AB209130-1|BAD92367.1|  879|Homo sapiens Hypothetical protein pr...    31   1.1  
X98654-1|CAA67224.1| 1244|Homo sapiens homologue of Drosphila re...    29   4.6  
BC022230-1|AAH22230.1| 1243|Homo sapiens PITPNM1 protein protein.      29   4.6  
AY429102-1|AAR06909.1| 1243|Homo sapiens phosphatidylinositol tr...    29   4.6  
AF334584-1|AAK01444.1| 1244|Homo sapiens NIR2 protein.                 29   4.6  

>BC128584-1|AAI28585.1|  974|Homo sapiens PITPNM family member 3
           protein.
          Length = 974

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 616 PREKWLRKRTQVKLRNV-TANHRAND 640


>BC128583-1|AAI28584.1|  974|Homo sapiens PITPNM family member 3
           protein.
          Length = 974

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 616 PREKWLRKRTQVKLRNV-TANHRAND 640


>AL389994-1|CAB97544.1|  912|Homo sapiens hypothetical protein,
           similar to (AF058693) M-RdgB2 retinal degeneration
           protei protein.
          Length = 912

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 574 PREKWLRKRTQVKLRNV-TANHRAND 598


>AF334586-1|AAK01446.1|  974|Homo sapiens NIR1 protein.
          Length = 974

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 616 PREKWLRKRTQVKLRNV-TANHRAND 640


>AB209130-1|BAD92367.1|  879|Homo sapiens Hypothetical protein
           protein.
          Length = 879

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KWL KRT+  L NV T +H A+D
Sbjct: 541 PREKWLRKRTQVKLRNV-TANHRAND 565


>X98654-1|CAA67224.1| 1244|Homo sapiens homologue of Drosphila
           retinal degeneration B gene protein.
          Length = 1244

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KW  KRT+  + NV T +H ASD
Sbjct: 900 PREKWQRKRTQVKIRNV-TSNHRASD 924


>BC022230-1|AAH22230.1| 1243|Homo sapiens PITPNM1 protein protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KW  KRT+  + NV T +H ASD
Sbjct: 899 PREKWQRKRTQVKIRNV-TSNHRASD 923


>AY429102-1|AAR06909.1| 1243|Homo sapiens phosphatidylinositol
           transfer protein membrane-associated 1 protein.
          Length = 1243

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KW  KRT+  + NV T +H ASD
Sbjct: 899 PREKWQRKRTQVKIRNV-TSNHRASD 923


>AF334584-1|AAK01444.1| 1244|Homo sapiens NIR2 protein.
          Length = 1244

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
           P++KW  KRT+  + NV T +H ASD
Sbjct: 900 PREKWQRKRTQVKIRNV-TSNHRASD 924


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,405,292
Number of Sequences: 237096
Number of extensions: 676980
Number of successful extensions: 1282
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)