Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0814.Seq
(415 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08035-1|CAA69291.1| 1250|Drosophila melanogaster retinal degene... 29 3.2
X57978-1|CAA41044.1| 1054|Drosophila melanogaster retinal degene... 29 3.2
BT011130-1|AAR82797.1| 729|Drosophila melanogaster HL04242p pro... 29 3.2
AY052111-1|AAK93535.1| 522|Drosophila melanogaster SD05804p pro... 29 3.2
AY051422-1|AAK92846.1| 1259|Drosophila melanogaster GH09970p pro... 29 3.2
AF109308-1|AAD16981.1| 514|Drosophila melanogaster putative G-p... 29 3.2
AE014298-1961|AAF48315.1| 1250|Drosophila melanogaster CG11111-P... 29 3.2
AE014298-1960|AAX52495.1| 1259|Drosophila melanogaster CG11111-P... 29 3.2
AE014298-1959|AAX52494.1| 1259|Drosophila melanogaster CG11111-P... 29 3.2
AE014298-1958|AAF48316.2| 1259|Drosophila melanogaster CG11111-P... 29 3.2
AE014296-90|AAF47379.2| 514|Drosophila melanogaster CG6936-PA, ... 29 3.2
AE014296-89|AAN11440.1| 522|Drosophila melanogaster CG6936-PB, ... 29 3.2
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P... 28 5.6
BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p pro... 27 7.4
AY122194-1|AAM52706.1| 644|Drosophila melanogaster LD44686p pro... 27 7.4
AF145646-1|AAD38621.1| 418|Drosophila melanogaster BcDNA.GH0792... 27 7.4
AE014298-1967|AAO41653.1| 644|Drosophila melanogaster CG33174-P... 27 7.4
AE014298-1966|AAO41652.1| 737|Drosophila melanogaster CG33174-P... 27 7.4
AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB... 27 7.4
AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA... 27 7.4
AY075445-1|AAL68258.1| 831|Drosophila melanogaster RE05944p pro... 27 9.8
AE013599-3187|AAF46714.2| 831|Drosophila melanogaster CG30394-P... 27 9.8
AE013599-3186|AAF46715.2| 831|Drosophila melanogaster CG30394-P... 27 9.8
>Y08035-1|CAA69291.1| 1250|Drosophila melanogaster retinal
degeneration B protein protein.
Length = 1250
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>X57978-1|CAA41044.1| 1054|Drosophila melanogaster retinal
degeneration B protein protein.
Length = 1054
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>BT011130-1|AAR82797.1| 729|Drosophila melanogaster HL04242p
protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 424 PREKWIKKRTSVKLKNV-AANHRAND 448
>AY052111-1|AAK93535.1| 522|Drosophila melanogaster SD05804p
protein.
Length = 522
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -3
Query: 173 NALTVPCCYASSLIIISSFVC---TASISF---KSLDVRGLCMLXYAICL 42
N L VP ++++ISS +C T ++ K ++ G C + Y +CL
Sbjct: 208 NCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCL 257
>AY051422-1|AAK92846.1| 1259|Drosophila melanogaster GH09970p protein.
Length = 1259
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>AF109308-1|AAD16981.1| 514|Drosophila melanogaster putative
G-protein-coupled receptorprotein.
Length = 514
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -3
Query: 173 NALTVPCCYASSLIIISSFVC---TASISF---KSLDVRGLCMLXYAICL 42
N L VP ++++ISS +C T ++ K ++ G C + Y +CL
Sbjct: 208 NCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCL 257
>AE014298-1961|AAF48315.1| 1250|Drosophila melanogaster CG11111-PB,
isoform B protein.
Length = 1250
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>AE014298-1960|AAX52495.1| 1259|Drosophila melanogaster CG11111-PD,
isoform D protein.
Length = 1259
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>AE014298-1959|AAX52494.1| 1259|Drosophila melanogaster CG11111-PC,
isoform C protein.
Length = 1259
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>AE014298-1958|AAF48316.2| 1259|Drosophila melanogaster CG11111-PA,
isoform A protein.
Length = 1259
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 194 PKKKWLSKRTKTILTNVXTRSHNASD 271
P++KW+ KRT L NV +H A+D
Sbjct: 936 PREKWIKKRTSVKLKNV-AANHRAND 960
>AE014296-90|AAF47379.2| 514|Drosophila melanogaster CG6936-PA,
isoform A protein.
Length = 514
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -3
Query: 173 NALTVPCCYASSLIIISSFVC---TASISF---KSLDVRGLCMLXYAICL 42
N L VP ++++ISS +C T ++ K ++ G C + Y +CL
Sbjct: 208 NCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCL 257
>AE014296-89|AAN11440.1| 522|Drosophila melanogaster CG6936-PB,
isoform B protein.
Length = 522
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -3
Query: 173 NALTVPCCYASSLIIISSFVC---TASISF---KSLDVRGLCMLXYAICL 42
N L VP ++++ISS +C T ++ K ++ G C + Y +CL
Sbjct: 208 NCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCL 257
>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
protein.
Length = 1333
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 157 GTVKALLRNFRVTEKEMAIKENQNDTNKCVXSVP*RQRXKQLER 288
GT++ R K++ IK + DT + S R++ KQLER
Sbjct: 127 GTIEKAKREVEKKVKDIEIKYEEMDTERSKRSDGIRKKVKQLER 170
>BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p
protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 151 QHGTVKALLRNFRVTEKEMAIKENQND 231
QH VKA LRN TEK+ +E D
Sbjct: 699 QHSHVKAFLRNKEETEKKNKTEEGDED 725
>AY122194-1|AAM52706.1| 644|Drosophila melanogaster LD44686p
protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 172 LLRNFRVTEKEMAIKENQNDTNKCVXSVP*RQRXKQLERN 291
LLR F+ E+E +++ +N T + + VP +R + L N
Sbjct: 254 LLRKFQRLEREAIVRQRKNGTYEFLSGVPITERTQFLALN 293
>AF145646-1|AAD38621.1| 418|Drosophila melanogaster BcDNA.GH07921
protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 151 QHGTVKALLRNFRVTEKEMAIKENQND 231
QH VKA LRN TEK+ +E D
Sbjct: 198 QHSHVKAFLRNKEETEKKNKTEEGDED 224
>AE014298-1967|AAO41653.1| 644|Drosophila melanogaster CG33174-PA,
isoform A protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 172 LLRNFRVTEKEMAIKENQNDTNKCVXSVP*RQRXKQLERN 291
LLR F+ E+E +++ +N T + + VP +R + L N
Sbjct: 254 LLRKFQRLEREAIVRQRKNGTYEFLSGVPITERTQFLALN 293
>AE014298-1966|AAO41652.1| 737|Drosophila melanogaster CG33174-PD,
isoform D protein.
Length = 737
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 172 LLRNFRVTEKEMAIKENQNDTNKCVXSVP*RQRXKQLERN 291
LLR F+ E+E +++ +N T + + VP +R + L N
Sbjct: 254 LLRKFQRLEREAIVRQRKNGTYEFLSGVPITERTQFLALN 293
>AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB,
isoform B protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 151 QHGTVKALLRNFRVTEKEMAIKENQND 231
QH VKA LRN TEK+ +E D
Sbjct: 699 QHSHVKAFLRNKEETEKKNKTEEGDED 725
>AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA,
isoform A protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 151 QHGTVKALLRNFRVTEKEMAIKENQND 231
QH VKA LRN TEK+ +E D
Sbjct: 699 QHSHVKAFLRNKEETEKKNKTEEGDED 725
>AY075445-1|AAL68258.1| 831|Drosophila melanogaster RE05944p
protein.
Length = 831
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 239 LLVSFWFSLIAISFSVTLKFLSNALTVPCCYASSLIIISSFVCTASISFKSL 84
L + F F I S+ L LSN +T CC+ +I + + T SF+ L
Sbjct: 21 LAMPFCFQKCGILLSIVLLVLSNGITRVCCH----YLIKTSLLTRRRSFEML 68
>AE013599-3187|AAF46714.2| 831|Drosophila melanogaster CG30394-PB,
isoform B protein.
Length = 831
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 239 LLVSFWFSLIAISFSVTLKFLSNALTVPCCYASSLIIISSFVCTASISFKSL 84
L + F F I S+ L LSN +T CC+ +I + + T SF+ L
Sbjct: 21 LAMPFCFQKCGILLSIVLLVLSNGITRVCCH----YLIKTSLLTRRRSFEML 68
>AE013599-3186|AAF46715.2| 831|Drosophila melanogaster CG30394-PA,
isoform A protein.
Length = 831
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 239 LLVSFWFSLIAISFSVTLKFLSNALTVPCCYASSLIIISSFVCTASISFKSL 84
L + F F I S+ L LSN +T CC+ +I + + T SF+ L
Sbjct: 21 LAMPFCFQKCGILLSIVLLVLSNGITRVCCH----YLIKTSLLTRRRSFEML 68
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,879,926
Number of Sequences: 53049
Number of extensions: 219039
Number of successful extensions: 566
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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