Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0804.Seq
         (398 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    42   0.004
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    33   2.7  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   3.6  
UniRef50_A7APP0 Cluster: Glutamate/Leucine/Phenylalanine/Valine ...    32   4.8  
UniRef50_A6DF79 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 41.9 bits (94), Expect = 0.004
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +2

Query: 74  GKCFR*CSSCDDPRISPLTXQYECPQ 151
           GKCFR C S ++ RISPLT +Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 65 FHQSRTKXRGSKAIRYRXSSN 3
          F   RTK RGSK IRYR SSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +1

Query: 85  SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 177
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


>UniRef50_A7APP0 Cluster: Glutamate/Leucine/Phenylalanine/Valine
           dehydrogenase family protein; n=1; Babesia bovis|Rep:
           Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
           family protein - Babesia bovis
          Length = 1025

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 133 AIRMPPVIPINHYLGVLKTNKIEPRSYSIIPCTEIFKQHF 252
           AIR+  ++P +HYL +L    +     +   C  IF +HF
Sbjct: 320 AIRLCGILPHSHYLSILTERLLNGSEMAYAYCASIFVEHF 359


>UniRef50_A6DF79 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 785

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 330 YRGALRXVSRWXDNFTLXKLECSKRVKMLLEYFXAWNN 217
           Y+G  + ++RW ++ T  KL  +K+ K    YF  WNN
Sbjct: 301 YKGEAQGLARWPNDKTT-KLPINKKPKKANPYFKRWNN 337


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,683,673
Number of Sequences: 1657284
Number of extensions: 4410693
Number of successful extensions: 7493
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7492
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)