Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0804.Seq
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14366-1|CAA74736.1|  433|Drosophila melanogaster lipase 1 protein.    27   9.2  
AY075506-1|AAL68315.1|  439|Drosophila melanogaster RE54405p pro...    27   9.2  
AE014134-1935|AAF52994.1|  439|Drosophila melanogaster CG7279-PA...    27   9.2  

>Y14366-1|CAA74736.1|  433|Drosophila melanogaster lipase 1 protein.
          Length = 433

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 160 INHYLGVLKTNKIEPRSYSIIPCTEIFKQHFYP 258
           + H++ ++K+ +  P SYS     ++++ H  P
Sbjct: 305 VKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPP 337


>AY075506-1|AAL68315.1|  439|Drosophila melanogaster RE54405p
           protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 160 INHYLGVLKTNKIEPRSYSIIPCTEIFKQHFYP 258
           + H++ ++K+ +  P SYS     ++++ H  P
Sbjct: 311 VKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPP 343


>AE014134-1935|AAF52994.1|  439|Drosophila melanogaster CG7279-PA
           protein.
          Length = 439

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 160 INHYLGVLKTNKIEPRSYSIIPCTEIFKQHFYP 258
           + H++ ++K+ +  P SYS     ++++ H  P
Sbjct: 311 VKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPP 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,045,064
Number of Sequences: 53049
Number of extensions: 207004
Number of successful extensions: 297
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)