Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0803.Seq
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    47   3e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.002
UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2; ...    42   0.007
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    38   0.15 
UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.82 
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    33   3.3  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    33   5.8  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   7.6  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 23/36 (63%), Positives = 25/36 (69%)
 Frame = +1

Query: 415 GAPTARRTNATTSFLTATILVYAIGAGITAAVAPDL 522
           G P AR  + TTSFLTA  L+YAIGAGITAA    L
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRL 65


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 74  GKCFR*CSSCDDPRISPLTSQYECPQ 151
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284



 Score = 35.5 bits (78), Expect = 0.82
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 457 LTATILVYAIGAGITAAVAPDL 522
           LTATIL+YAIGAGITAA    L
Sbjct: 314 LTATILIYAIGAGITAAAGTRL 335


>UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus pneumoniae|Rep: Putative uncharacterized
           protein - Streptococcus pneumoniae SP3-BS71
          Length = 81

 Score = 42.3 bits (95), Expect = 0.007
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = -1

Query: 506 AAVIPAPIAYTKIVAVKKLVVAFVRRAVG 420
           AAVIPAPIAY K+VAVKKLVV    R  G
Sbjct: 4   AAVIPAPIAYIKVVAVKKLVVELWARLAG 32


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 37.9 bits (84), Expect = 0.15
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = -1

Query: 65 FHQSRTKVRGSKAIRYRPSSN 3
          F   RTKVRGSK IRYRPSSN
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSN 26


>UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 73

 Score = 35.5 bits (78), Expect = 0.82
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -1

Query: 506 AAVIPAPIAYTKIVAVKK 453
           AAVIPAPIAY K+VAVKK
Sbjct: 44  AAVIPAPIAYIKVVAVKK 61


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -1

Query: 65 FHQSRTKVRGSKAIRYRPSSN 3
          FH  RTKV GSK IRY PS N
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLN 26


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 393 VSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 491
           V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +1

Query: 85  SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 177
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,169,638
Number of Sequences: 1657284
Number of extensions: 9884805
Number of successful extensions: 25419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25413
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)