Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0803.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   1.6  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   5.0  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   6.6  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    23   8.8  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/49 (28%), Positives = 17/49 (34%)
 Frame = +1

Query: 322 PR*DFDIEPAFFRTPAHRRYAPQTCQYHRGCGAPTARRTNATTSFLTAT 468
           PR  F   P + R P HR              +PT    + TT   T T
Sbjct: 98  PRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTTAEASTTTEAATTT 146


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 500 VIPAPIAYTKIVAVKKLV 447
           V PAP+A  K V VKK+V
Sbjct: 17  VAPAPLAKPKKVEVKKVV 34


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 115 SWIVARRTSAKAFAKGVFINQERKLEVRR 29
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +2

Query: 335 LILNRRFLE--RRLTDDMLRKRVSITADAVHRQRGAQM 442
           L LN+   +  R+   D++++  SIT +AVH  +  +M
Sbjct: 322 LALNQELQDKARQNITDVMKQHSSITYEAVHEMKYIEM 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,736
Number of Sequences: 2352
Number of extensions: 10217
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)