Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0802.Seq
(422 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 0.92
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 22 2.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 3.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 3.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 3.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 3.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 3.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 3.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 3.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 3.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 3.7
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 6.5
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.4 bits (48), Expect = 0.92
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 394 RTPMFIVKAYLPVNESFGFT 335
R P F P+N SF FT
Sbjct: 627 RAPTFTALGLFPINGSFAFT 646
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 22.2 bits (45), Expect = 2.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -3
Query: 369 PTYLSMSRSVLLPICVPTPADRPSRSAYSTIGRSSLETLRTSEQALQRCTGNEKEE 202
PT + +L+PI T + S S YS E++R ++RC +E+
Sbjct: 189 PTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESVRPLSLVVRRCEEPTEEK 244
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 55 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 103
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 335 CRFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKRKGLKEGL 183
C++A TG+ + + G P R P S P N K GL L
Sbjct: 99 CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +3
Query: 255 GSPGRTCQWSNTHC 296
G G+TC ++HC
Sbjct: 135 GWKGKTCSLKDSHC 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,367
Number of Sequences: 336
Number of extensions: 2102
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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