Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0802.Seq
(422 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 108 7e-24
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 108 7e-24
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 108 7e-24
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 108 7e-24
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 108 7e-24
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 108 7e-24
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 68 1e-11
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 68 1e-11
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 68 1e-11
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 68 1e-11
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 66 3e-11
AY093673-1|AAM44451.1| 169|Homo sapiens p53-activated protein-2... 34 0.23
BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2 pr... 29 6.5
AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding fact... 29 6.5
AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein co... 29 6.5
AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein co... 29 6.5
AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding prot... 29 6.5
AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein co... 29 6.5
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 779 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 838
Query: 211 ERGK 200
+ K
Sbjct: 839 RKRK 842
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 779 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 838
Query: 211 ERGK 200
+ K
Sbjct: 839 RKRK 842
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 279 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 338
Query: 211 ERGK 200
+ K
Sbjct: 339 RKRK 342
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 321 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 349
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 779 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 838
Query: 211 ERGK 200
+ K
Sbjct: 839 RKRK 842
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 438 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 497
Query: 211 ERGK 200
+ K
Sbjct: 498 RKRK 501
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 480 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 508
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 108 bits (260), Expect = 7e-24
Identities = 46/64 (71%), Positives = 54/64 (84%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPANLRASPTTLYRKR 212
TPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQ+LPGDP + + P+ + +
Sbjct: 779 TPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAET 838
Query: 211 ERGK 200
+ K
Sbjct: 839 RKRK 842
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 266 PWRPCEPQSKPYNVVQETRKRKGLKEGLP 180
P P + S+P VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 68.1 bits (159), Expect = 1e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -2
Query: 406 VPGGRTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 254
+PG +P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDP
Sbjct: 868 IPG--SPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDP 916
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 68.1 bits (159), Expect = 1e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -2
Query: 406 VPGGRTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 254
+PG +P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDP
Sbjct: 863 IPG--SPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDP 911
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 68.1 bits (159), Expect = 1e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -2
Query: 406 VPGGRTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 254
+PG +P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDP
Sbjct: 863 IPG--SPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDP 911
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 68.1 bits (159), Expect = 1e-11
Identities = 27/51 (52%), Positives = 39/51 (76%)
Frame = -2
Query: 406 VPGGRTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 254
+PG +P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDP
Sbjct: 741 IPG--SPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDP 789
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 66.5 bits (155), Expect = 3e-11
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 391 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 254
T MFI+KA LPV ESFGF ++R T G A PQ VF HW+++P DP
Sbjct: 756 TDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDP 801
>AY093673-1|AAM44451.1| 169|Homo sapiens p53-activated protein-2
protein.
Length = 169
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -1
Query: 332 RFAFQHRRTGLPAVRIRPLAGPPWRPCEPQSKPYNVVQETRKR 204
R Q R+TG R++PLA PP P P P N ++TR R
Sbjct: 65 RLRSQPRQTGRQPPRVQPLAPPPGAPA-PLPNPQNCRRKTRSR 106
>BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261
>AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding factor
CLIM1 protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261
>AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 331
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261
>AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261
>AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding protein
protein.
Length = 347
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 210 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 237
>AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 292 CVFDHWQVLPGDPANLRASPTTLYRKRE 209
C+F WQ + PA PTT RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,002,825
Number of Sequences: 237096
Number of extensions: 1273439
Number of successful extensions: 3365
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3363
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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