Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0800.Seq
(419 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 44 7e-05
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 40 6e-04
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.001
SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 38 0.003
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.003
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.003
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 38 0.004
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 38 0.004
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 38 0.004
SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4) 36 0.010
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.024
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.031
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.042
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.042
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 34 0.042
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.042
SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2) 34 0.042
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.042
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.055
SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21) 33 0.073
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.096
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 33 0.13
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07) 33 0.13
SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 32 0.22
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.29
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 31 0.29
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 31 0.39
SB_42214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.39
SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021) 31 0.51
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 31 0.51
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 31 0.51
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.51
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.68
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 30 0.68
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 30 0.89
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_12369| Best HMM Match : S-antigen (HMM E-Value=0.11) 29 1.6
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 29 1.6
SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2) 29 2.1
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 28 2.7
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062) 28 2.7
SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22) 28 2.7
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 28 2.7
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 28 3.6
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 28 3.6
SB_32260| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_16233| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 27 4.8
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 27 4.8
SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_9759| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 4.8
SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24) 27 4.8
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 27 6.3
SB_36165| Best HMM Match : YABBY (HMM E-Value=5.4) 27 6.3
SB_20017| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 27 6.3
SB_35219| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 27 6.3
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0) 27 8.3
SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_5465| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 27 8.3
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 43.6 bits (98), Expect = 7e-05
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 28 VRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIW 207
V+ +K +G K+ V+ D + V G ++GLLG +G GKTT L+ + + G +
Sbjct: 292 VKGLWKKFGRGKKGKVVVKDVYFGVTPGEVFGLLGPNGAGKTTTLNMMTAGIPASRGSVS 351
Query: 208 VLG 216
V G
Sbjct: 352 VAG 354
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +1
Query: 91 HVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
++ + EG++ ++G GCGK+TLLS ++G + G+++V G
Sbjct: 297 NLNIPEGSLVAVVGQVGCGKSTLLSALLGETEKTKGQVYVKG 338
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 40 FKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
FK+ G + +L + +V G + L+G SG GKTTLL+ + GR ++G++ + G
Sbjct: 12 FKNIGVSINGREILKTINGKVRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLING 70
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 249 RERVGYMPQEIALYGEFTIKETM 317
++R+GY+ QE + T+KET+
Sbjct: 78 KKRIGYVMQEDIFFSHLTLKETL 100
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +1
Query: 22 VCVRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGE 201
V ++ K YGSN+ VL ++VA G + L+G SG GK+TLL C+ + N G
Sbjct: 22 VSLKDLRKSYGSNE----VLKGISLDVAPGEVVCLIGPSGSGKSTLLRCVNLLEQPNEGT 77
Query: 202 IWVLG 216
I V G
Sbjct: 78 IHVGG 82
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +1
Query: 91 HVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
++ + +G++ ++G GCGK+TLLS ++G + +GE++V G
Sbjct: 568 NLNIPDGSLVAVVGQVGCGKSTLLSALLGETEKVTGEVYVKG 609
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKL 189
+L+D +E+ G YGL+G +GCGK+T+L+ I G+R++
Sbjct: 70 LLTDAKLELNTGRKYGLIGLNGCGKSTMLTAI-GKREI 106
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 49 YGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEI 204
+ +K V D ++ V E I ++GA G GKTTLLS I+G+ G+I
Sbjct: 417 FQKHKGGRDVFCDVNLSVEENDIVAVIGAVGSGKTTLLSAILGQVSCTKGKI 468
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 121 GLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
G+ G +G GKT+++SC++ R +G+I + G
Sbjct: 1078 GIAGRTGAGKTSIVSCLL-RMPEATGDIMIDG 1108
>SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +1
Query: 19 AVCVRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSG 198
A+ +R K YG+ + H + ++VAEG Y LLG +G GK+T + + +SG
Sbjct: 108 ALSIRQLTKTYGNGFQALHGID---LDVAEGDFYALLGPNGAGKSTTIGILSTLVTKSSG 164
Query: 199 EIWVLG 216
+ V G
Sbjct: 165 TVNVFG 170
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 79 LSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
L D +EV +G++ G+ G+ G GK++LL CI+ + + G + + G
Sbjct: 105 LFDIDLEVKKGSLIGICGSVGSGKSSLLQCILSQMRKTKGRVGIGG 150
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 4 QKRQQAVCVRHAFKHY-GSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGR 180
Q ++++V V+ K Y GS++ L G + G +GLLG +G GKTT S + G
Sbjct: 1246 QIKKESVIVKDLTKVYHGSDRTAVDHLCIG---IPRGECFGLLGVNGAGKTTTFSMLTGD 1302
Query: 181 RKLNSGEIWVLG 216
+ ++ G ++ G
Sbjct: 1303 QSISEGTAYLDG 1314
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 106 EGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWV 210
+G I LLG +G GKTT +S + G SG +
Sbjct: 226 KGQITALLGHNGAGKTTTMSILTGLFTPTSGSAMI 260
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 70 NHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
N +++D V++ EG++ + G G GKT+LL I G L SGE++ G
Sbjct: 426 NVLINDITVQLPEGSLTAVTGPVGSGKTSLLLTISGELPLASGELYCKG 474
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
+V G + G++GA G GK++LL+ I+G L+ G I V G
Sbjct: 374 DVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRVQG 413
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 28 VRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEI 204
V+ ++YG + H+L +V G + LLG +G GKTTLL C++G G +
Sbjct: 86 VQQLHQYYGGS----HILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMGLIPAKEGAV 140
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
+V G + G++GA G GK++LL+ I+G L+ G I V G
Sbjct: 43 DVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRVQG 82
>SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 235
Score = 36.3 bits (80), Expect = 0.010
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 91 HVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWV 210
+++V G++ ++G GCGK+TLLS ++G + G ++V
Sbjct: 195 NLDVPAGSLVAVVGQVGCGKSTLLSALLGETERLDGMVYV 234
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 35.9 bits (79), Expect = 0.014
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 58 NKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGR 180
N H+L+D + V G++ ++GASG GK+TL++ + R
Sbjct: 203 NGNIKHILNDVNGTVKPGSLLAIMGASGAGKSTLMNVLAHR 243
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 35.1 bits (77), Expect = 0.024
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 109 GTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLGGK 222
G + + G GCGK+TLLS I+G ++SG++ + GGK
Sbjct: 513 GELVLVTGPVGCGKSTLLSVILGEIPISSGKV-LRGGK 549
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 34.7 bits (76), Expect = 0.031
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 46 HYGSNKRPN-HVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCI 171
H+ RP+ VL H+ + G L+G SGCGK+TL+ +
Sbjct: 123 HFQYPSRPDVKVLKGLHLTIRSGQTVALVGESGCGKSTLIKLV 165
Score = 32.7 bits (71), Expect = 0.13
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 64 RPN-HVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCI 171
RPN VL +EV +G L+G SGCGK+T +S +
Sbjct: 679 RPNVKVLRGLSLEVNQGQTLALVGPSGCGKSTTVSLL 715
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 79 LSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
LS +E+ + + G GCGKT+LLS I+G + G++ V G
Sbjct: 431 LSHVTLELRNSDLVLVTGPVGCGKTSLLSAILGELSVRKGDLSVNG 476
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 34.3 bits (75), Expect = 0.042
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 94 VEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
+++ EG I LLG +G GK+TL+ + G + +SG + G
Sbjct: 517 MDIYEGQITALLGHNGAGKSTLIGALTGMIQPSSGTALIYG 557
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 34.3 bits (75), Expect = 0.042
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 251 PGTPDPFVPGFPPSTHISPL-FNFRLPTMQDRSVVFPQPDAPSRPYMVPS 105
P P+ F+P PP+ HI P N +PT + P P PS P P+
Sbjct: 298 PAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPPN 347
Score = 31.5 bits (68), Expect = 0.29
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 251 PGTPDPFVPGFPPSTHISPL-FNFRLPTMQDRSVVFPQPDAPSRPYMVPS 105
P TP+PF+P P+ I P N +P + S+ P AP PY+ P+
Sbjct: 254 PATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSI----PLAPPNPYIPPA 299
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 257 AFPGTPDPFVPGFPPSTHISPL-FNFRLPTMQDRSVVFPQPDAPSRPYMVPSA 102
+ P P+P +P PP+ +I P N +P+ + P AP PY +P+A
Sbjct: 278 SIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHI---PPAPPNPY-IPTA 326
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = -1
Query: 248 GTPDPFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSRPYM--VPSATST*PSLRT 75
GTP+P + PP T + P P P P P +P+A T P T
Sbjct: 152 GTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPPTPPMPET 211
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Frame = -1
Query: 251 PGTPDPFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQ------PDAPSRPYMVPS 105
P +P+P +P PP+ I N +P + P P AP P++ P+
Sbjct: 263 PASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPA 317
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 34.3 bits (75), Expect = 0.042
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
+LS ++ + +G + G++G G GK++LLS + +G+++V G
Sbjct: 79 LLSGLNLSIRKGQLIGVIGGVGSGKSSLLSALTAEMDKLTGQVFVAG 125
>SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2)
Length = 110
Score = 34.3 bits (75), Expect = 0.042
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 34 HAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGR 180
H + +G ++ + D + V GT ++G SG GK+TLL VG+
Sbjct: 10 HVSRSFGEGEQRVDAIVDVSLGVNPGTFAAVMGPSGSGKSTLLGLAVGK 58
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 34.3 bits (75), Expect = 0.042
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLGGKPGTKGSGVP 249
+L ++ +A G YGL+G +G GKTTLL + R + I +L + G P
Sbjct: 221 LLKGANLAIAFGRRYGLVGRNGIGKTTLLRTLSKRELFVASNISILYVEQEVVGDETP 278
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 33.9 bits (74), Expect = 0.055
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 VLSDG-HVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
V DG + + EG I LLG +G GKTTL+S + G SG V G
Sbjct: 323 VAVDGVSLNMYEGQITALLGHNGAGKTTLMSMLTGLFPPTSGNAVVNG 370
Score = 31.9 bits (69), Expect = 0.22
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 100 VAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSG 198
V G +GLLG +G GKTT + G + SG
Sbjct: 1278 VPMGECFGLLGINGAGKTTTFRMLTGDETMTSG 1310
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 249 RERVGYMPQEIALYGEFTIKETMMYFGWIFGMETKEI 359
R+R+GY PQ AL + T +E + + + G+ ++I
Sbjct: 1327 RQRIGYCPQFDALIDQMTGREVLYMYARLRGVPEQDI 1363
>SB_20217| Best HMM Match : Amidase (HMM E-Value=2.3e-21)
Length = 457
Score = 33.5 bits (73), Expect = 0.073
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 28 VRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGAS------GCGKTTLLSCIVGRRKL 189
+R F H S + + ++ + + +AE T + ++G S G T +SCI GRR L
Sbjct: 197 LREGFGHQNSEEDVDRIVKEASIRLAERTGHEVVGISVPMHLQGSALLTAISCIGGRRVL 256
Query: 190 NSG 198
+ G
Sbjct: 257 HDG 259
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.096
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 49 YGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
YGS + VLSD +++ + G+ G G GK++LL I+ L SGE V G
Sbjct: 256 YGSLAKS--VLSDITLKLKGSRLIGITGPCGSGKSSLLLAILNEMSLISGEAVVQG 309
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 33.1 bits (72), Expect = 0.096
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 109 GTIYGLLGASGCGKTTLLSCIVGRRKLNSG 198
G + GL+G +G GK+T L + G++K N G
Sbjct: 111 GEVLGLVGTNGIGKSTALKILAGKQKPNLG 140
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
VL D GT+ ++GASG GK+TL++ + R N G I V G
Sbjct: 132 VLFDVSGRAEPGTLLAVMGASGAGKSTLMNVLAYR---NLGSIQVTG 175
>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
Length = 659
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 13 QQAVCVRHAFKHYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLN 192
++A +R N + ++L D +EV++ ++ ++G G GK+TLL I G
Sbjct: 386 KKAALIRVKSNPRQENDKSVNILHDISMEVSDDSLVAVIGPVGSGKSTLLETISGMDPTF 445
Query: 193 SGEIWVLG 216
G++ G
Sbjct: 446 RGKVETRG 453
>SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
E+ +G + ++GA G GK++LL ++G L G+I G
Sbjct: 403 EIGKGDLLVVVGAVGSGKSSLLMAVLGELPLTRGDIKTRG 442
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 31.9 bits (69), Expect = 0.22
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNS--GEIWVLGGK 222
++ G + ++G SG GKTT L+ + G+ + GEI++ G K
Sbjct: 219 KIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGTRGGEIFINGKK 262
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 31.5 bits (68), Expect = 0.29
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGR 180
E+ G + ++G SG GKTTLL+ + G+
Sbjct: 160 EIRAGEVTAIMGPSGAGKTTLLNTLSGK 187
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 31.5 bits (68), Expect = 0.29
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 49 YGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
YG ++ P + +A G GL+G SG GKTT + I +N G I + G
Sbjct: 75 YGRHEAP--LYDRFSARIAPGERVGLVGHSGSGKTTFIKLIQRLYDVNGGRIAIDG 128
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 31.1 bits (67), Expect = 0.39
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 55 SNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG-GKPGT 231
S K H+ G V G + ++GASG GKTTL++ + R N G + V G K
Sbjct: 32 SGKVYRHLCFSGKVN--PGELVAVMGASGSGKTTLINVLAHR---NIGSMHVSGVVKANN 86
Query: 232 KGSGVPGNASATCLRR 279
K G+ N+ + +++
Sbjct: 87 KTLGLAINSISAYIQQ 102
>SB_42214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 203 ISPLFNFRLPTMQDRSV-VFPQPDAPSRPYMVPSATST*PSLR 78
+ PL+N+ L D + P P+ S P M+P T T P R
Sbjct: 77 VKPLYNYALVPFHDPGPEMIPVPETISGPEMIPKTTPTDPGTR 119
>SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021)
Length = 127
Score = 30.7 bits (66), Expect = 0.51
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 52 GSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNS--GEIWVLGGK 222
GS K+ VL+ ++ G + ++G SG GKTT L+ + G+ + G+I++ G K
Sbjct: 1 GSKKK---VLAGVTGKINSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGVK 56
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 30.7 bits (66), Expect = 0.51
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 85 DG-HVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
DG ++ + EG I LG +G GKTT +S + G +G ++ G
Sbjct: 519 DGLNLNLYEGQIMSFLGHNGAGKTTTMSILTGLFPPTAGTGYIYG 563
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 30.7 bits (66), Expect = 0.51
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = -1
Query: 311 LLDGELSVQSYLLRHVADAFPGTPDPFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQPDA 132
L D EL Q +L R +P +P P P S P +P + P P
Sbjct: 857 LQDYELQAQGHLARKTPRDYPCAHEPTSPATPAS---GPPIKAPIPLKET-----PTPAL 908
Query: 131 PSRPYMVPSATST 93
S P M+P AT T
Sbjct: 909 ESAPAMMPDATDT 921
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 30.7 bits (66), Expect = 0.51
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 79 LSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
LSD + + + GA GCGKT+LL I+ + G + V G
Sbjct: 417 LSDVSLSAHSSQLVMVTGAVGCGKTSLLMAILREIPIKHGSVDVRG 462
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 30.3 bits (65), Expect = 0.68
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 97 EVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNS--GEIWVLGGK 222
++ G + ++G SG GKTT L+ + G+ + G+I++ G K
Sbjct: 337 KIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGVK 380
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 30.3 bits (65), Expect = 0.68
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 115 IYGLLGASGCGKTTLLSCIVGRRKLNSGEI 204
I GL+G +G GKTTLL + G SG I
Sbjct: 3 IIGLVGENGNGKTTLLRSLCGELNPTSGTI 32
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 29.9 bits (64), Expect = 0.89
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 67 PNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
P LS + +G + + G G GK+TLL I+ + G+IW G
Sbjct: 160 PKSSLSRLSFRINQGGLLAVTGPIGSGKSTLLLTILHELPKHRGQIWRSG 209
>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 47 ITGLTNGPTTSLATVMLRLLKAPYTVYLVRRAVGRPRFCLASW 175
ITG T T L + L AP+ R VG R+C+ SW
Sbjct: 145 ITGKTRTATIILTWFLGILYTAPWFYVAKIRTVGLARYCVVSW 187
>SB_12369| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 1123
Score = 29.1 bits (62), Expect = 1.6
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 43 KHYGSNKRPNHVLSDGH----VEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWV 210
K G + P + G V V G + L ++G G+ +L + VG +GE W
Sbjct: 644 KGKGDEEEPEEINKQGDSKQAVLVDMGVVERRLESNGSGEDSLQAG-VGVSDTRNGERWD 702
Query: 211 LGGKPGTKGSG 243
+GG PGT SG
Sbjct: 703 IGG-PGTSKSG 712
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 49 YGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCI 171
Y ++ VL+ + V G L+G SGCGK+T++ I
Sbjct: 660 YYPSRNEVKVLNGLSLTVRSGQTVALVGESGCGKSTVIKLI 700
>SB_9604| Best HMM Match : Cbl_N3 (HMM E-Value=1.2)
Length = 317
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = -3
Query: 288 TELSPEACSRRVPGDTRPFCSRLPSEHPYLAAV*FPSAHDARQKRGLPTARRTK*TVYGA 109
T L P S ++P T+PF S L +E + +V F S D + +
Sbjct: 67 TSLGP-TLSAKIPSSTKPFASFLQNE--VVNSVFFESTDD---QEVIKICESLHPGFAAG 120
Query: 108 FSNLNMTVAKDVVGPFVRPV 49
+ N++M V K+++ ++P+
Sbjct: 121 YDNIHMDVVKNIIDLILKPI 140
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -1
Query: 236 PFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQ-PDAPSR--PYMVPSATST*PS 84
P +PG PP T P P ++ P P APSR P + P A+ P+
Sbjct: 640 PSLPGTPPETKTKPPLAPYPPKTSPKTTPKPHIPPAPSRPPPQLPPEASKAVPT 693
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 109 GTIYGLLGASGCGKTTLLSCIVGRRKLNSGEI 204
G + + G G GK+TLL I G LN+G I
Sbjct: 485 GDLVIITGPVGSGKSTLLMTIQGELPLNAGSI 516
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEI 204
+++D + A G + G +GCGKT+LL I G + SG++
Sbjct: 1561 LVADLDLVFARGQNVLITGMAGCGKTSLLRVIRGLWEPLSGDV 1603
>SB_32544| Best HMM Match : Extensin_2 (HMM E-Value=0.0062)
Length = 282
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 257 AFPGTPDPFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSRP 120
AF +P P + P +PLF+ P++Q RS F PS P
Sbjct: 170 AFLSSPQPSLRVRTPPFKSAPLFSSPQPSLQVRSPPFKSAAFPSSP 215
>SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22)
Length = 245
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 254 FPGTPDP-FVPGFPPSTHISP 195
+PGTP P P FPPS SP
Sbjct: 185 YPGTPPPPMYPAFPPSFPFSP 205
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 76 VLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVL 213
+L D ++V+ + ++G G GK+TLLS I G L SG I L
Sbjct: 797 ILQDIELDVSGSCLVVVVGPVGSGKSTLLSTICG---LESGFIGFL 839
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 258 VGYMPQEIALYGEFTIKETMMYFGWIFGMETKEI 359
+GY PQ AL E T +E ++ + + G+ KEI
Sbjct: 1569 IGYCPQFDALIDEMTSEEHILLYARLRGVPEKEI 1602
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 230 VPGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSRPYMVP 108
VPG TH + L N R + + P+P RP MVP
Sbjct: 398 VPGGTGDTHENGLVNIRRVSSNSDVLSPPEPAEDDRPTMVP 438
>SB_32260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 258 VGYMPQEIALYGEFTIKETMMYFGWIFGMETKEI 359
+GY PQ AL E T +E ++ + + G+ KEI
Sbjct: 13 IGYCPQFDALIDEMTSEEHILLYARLRGVPEKEI 46
>SB_16233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 242 VSPGTRRLHASGDSSVRRVHHQGDHDVLR 328
+S RLH G ++RRV +G+ DV+R
Sbjct: 406 ISGAVVRLHGVGGLTLRRVRERGELDVVR 434
>SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16)
Length = 154
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 254 FPGTPDP-FVPGFPPSTHISP 195
+PGTP P P FPPS SP
Sbjct: 95 YPGTPPPPMYPAFPPSFPSSP 115
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 49 YGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCIVG 177
+GS +R + GH+ A TI +G G ++T+ CIVG
Sbjct: 652 HGSARRTITLCIGGHLS-ARHTITLCIGGHGSARSTITLCIVG 693
>SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 254 FPGTPDP-FVPGFPPSTHISP 195
+PGTP P P FPPS SP
Sbjct: 148 YPGTPPPPMYPAFPPSFPSSP 168
>SB_9759| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 387
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 258 VGYMPQEIALYGEFTIKETMMYFG 329
+ +MP E LYG FT++ + FG
Sbjct: 132 IRWMPPEALLYGRFTVESDVYSFG 155
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 258 VGYMPQEIALYGEFTIKETMMYFG 329
+ +MP E LYG FT++ + FG
Sbjct: 315 IRWMPPEALLYGRFTVESDVYSFG 338
>SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24)
Length = 245
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -1
Query: 254 FPGTPDP-FVPGFPPSTHISP 195
+PGTP P P FPPS SP
Sbjct: 185 YPGTPPPPMYPAFPPSFPSSP 205
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 311 DHDVLRLDLRHGDXGDRGSSSVPAR-LSGPAQREPNG 418
+ D +D + G+ G + AR +SGP + EPNG
Sbjct: 1181 EEDDTSVDRQDGEPGTNVQDTKSARQVSGPGEEEPNG 1217
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 46 HYGSNKRPNHVLSDGHVEVAEGTIYGLLGASGCGKTTLLSCI 171
+Y ++ HVL + + G++G +G GK++LL+ +
Sbjct: 762 YYSYHQSLPHVLKNVKFSIRNNEKVGIVGRTGAGKSSLLAVL 803
>SB_36165| Best HMM Match : YABBY (HMM E-Value=5.4)
Length = 374
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = -1
Query: 293 SVQSYLLRHVADAFPGT-PDPFVPGFPPSTHISPLFN---FRLPTMQDRSVVFPQPDAPS 126
++ SY+ H+ P P P++P PP P ++ P + VV D P
Sbjct: 6 TLSSYMKYHIVRGTPSPLPRPYLPALPPHKSTKPSYSRFLVEAPFTALQGVVADARDPPK 65
Query: 125 RP 120
P
Sbjct: 66 PP 67
>SB_20017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 209 CSEGSLEQKGLVSPG-TRRLHASGDSSVRRVHHQGDHDV 322
CS S G + P + LH GD+S R+VH + D +V
Sbjct: 106 CSGTSRPNGGALGPDWSSDLHLHGDASTRQVHVEYDCEV 144
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 244 HQTLLFQASLRAPISRR-CLISVCPRCKTEAWSSHSPTHQ 128
H ++ R P +RR C S+CP T + S SPT Q
Sbjct: 25 HVLYPWKCEARDPEARRLCACSLCPSLPTSSTHSTSPTVQ 64
>SB_35219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 353 LXLHAEDPAEVHHGLLDGELSVQSYLLRHVADAFPGTPDP 234
+ LH+ P + H L V++ +L+H + FP P P
Sbjct: 295 IVLHSSVPFGIKH-LESDRQEVENIMLKHTFELFPNLPKP 333
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 248 GTPDPFVPGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSR 123
G P PF G PP + P R+P+ V +P D P R
Sbjct: 488 GPPPPFYRGPPPPRGMPPPPRQRMPSQGPPQVHYPSQD-PQR 528
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 130 GASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
G+ GCGKT+LL I+ + G + V G
Sbjct: 464 GSVGCGKTSLLMAILKEIPIKHGSVDVRG 492
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 130 GASGCGKTTLLSCIVGRRKLNSGEIWVLG 216
G GCGKT LL I+ L G + + G
Sbjct: 514 GPVGCGKTALLMAILKEIPLKQGSVTLCG 542
>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 675
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 214 RAPISRR-CLISVCPRCKTEAWSSHSPT 134
+ P SRR C I CPR +E WS S T
Sbjct: 448 KKPSSRRQCNIRPCPRWISEQWSQCSVT 475
>SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 227 PGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSRPYMVPSATST*PSLRT 75
P F S PL + +++ + FP P A S P V + PSL +
Sbjct: 159 PMFSCSNSFGPLSESPIENLENSTSFFPTPLATSSPLQVEAGHPRPPSLES 209
>SB_5465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 810
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 227 PGFPPSTHISPLFNFRLPTMQDRSVVFPQPDAPSRPYMVPSATST*PSLRT 75
P F S PL+ + +++ + FP P A S P + PSL +
Sbjct: 157 PMFSYSNSFGPLYESPIENLENSTSFFPTPLATSSPLQFEAGHPRPPSLES 207
>SB_56820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 236 PFVPGFPPSTHISPLFNFRL 177
PF+P F P T +P F +R+
Sbjct: 55 PFLPNFQPLTENAPAFEYRI 74
>SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 276 PEACSRRVPGDTRPFCSRLPSEHP 205
P +R VP + RPF +P E P
Sbjct: 214 PRQFAREVPPEPRPFAQEVPQEAP 237
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 276 PEACSRRVPGDTRPFCSRLPSEHP 205
P +R VP + RPF +P E P
Sbjct: 1795 PRQFAREVPPEPRPFAQEVPQEAP 1818
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,483
Number of Sequences: 59808
Number of extensions: 340652
Number of successful extensions: 1266
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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