Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0799.Seq
(436 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 25 0.48
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 25 0.48
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 25 0.48
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 25 0.48
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 25 0.48
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 3.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 3.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 6.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 7.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 7.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 7.9
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 300 RRFLERRLTDDMLRKLSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 148
R+ + R D R+ S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 300 RRFLERRLTDDMLRKLSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 148
R+ + R D R+ S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 300 RRFLERRLTDDMLRKLSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 148
R+ + R D R+ S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 300 RRFLERRLTDDMLRKLSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 148
R+ + R D R+ S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 300 RRFLERRLTDDMLRKLSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 148
R+ + R D R+ S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 3.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 199 VVAFVRRAVGAPHPR*Y*QFAEHIVGEPA 285
V+AF R G P Y Q E + G PA
Sbjct: 1190 VLAFTRVGDGVPTTVTYCQTEEDVPGSPA 1218
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 3.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 199 VVAFVRRAVGAPHPR*Y*QFAEHIVGEPA 285
V+AF R G P Y Q E + G PA
Sbjct: 1186 VLAFTRVGDGVPTTVTYCQTEEDVPGSPA 1214
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 20 RHGEVVTKNNDT 55
R+ E+V KNNDT
Sbjct: 336 RNIEIVAKNNDT 347
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 204 NYELFNRNNFSIRYWSWNY 148
NY N NN+ Y++ NY
Sbjct: 95 NYNNNNYNNYKKLYYNINY 113
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 204 NYELFNRNNFSIRYWSWNY 148
NY N NN+ Y++ NY
Sbjct: 105 NYNNNNYNNYKKLYYNINY 123
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 70 PRNRNEYTLNILTRNNW 120
PRN +EY N L W
Sbjct: 368 PRNIDEYNNNDLDTKKW 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,819
Number of Sequences: 438
Number of extensions: 2374
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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