Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0798.Seq
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 65 5e-12
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 60 1e-10
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 52 5e-08
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 31 0.100
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 25 0.14
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 0.93
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 0.93
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 1.6
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 2.2
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 25 3.8
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 3.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 5.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 5.0
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 5.0
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 6.6
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 6.6
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 24 8.7
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 24 8.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 24 8.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 64.9 bits (151), Expect = 5e-12
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = -3
Query: 416 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTS 237
IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAK 593
Query: 236 RK 231
+K
Sbjct: 594 QK 595
Score = 36.3 bits (80), Expect = 0.002
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++E+E KQKELE + NPI+ K+YQ
Sbjct: 587 KDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 60.5 bits (140), Expect = 1e-10
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = -3
Query: 416 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTS 237
IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K
Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDK 593
Query: 236 RK 231
+K
Sbjct: 594 QK 595
Score = 40.7 bits (91), Expect = 9e-05
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++EYE KQKELEG+ NPI+ K+YQ
Sbjct: 587 KDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 51.6 bits (118), Expect = 5e-08
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -3
Query: 425 KETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKR 252
KE I+A+N LE+Y +S+K +D E+L K+ DKQ +LD D +WL+ + A K
Sbjct: 561 KERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKE 620
Query: 251 SMSTSRKNWKA 219
R+ A
Sbjct: 621 EFEDQRQKLDA 631
Score = 25.8 bits (54), Expect = 2.8
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMY 190
+EE+E ++++L+ + +PI K+Y
Sbjct: 619 KEEFEDQRQKLDAVVHPITQKLY 641
>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 30.7 bits (66), Expect = 0.100
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 291 HQVAGFQPAGRQEEYEHKQKEL 226
H + GFQP+ RQE+Y+H +L
Sbjct: 290 HHLNGFQPSQRQEDYKHTMVDL 311
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.0 bits (52), Expect(2) = 0.14
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
+++ + A AL + E+ I +K T+ D+ NDT +WLD +L DK
Sbjct: 184 REELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLGDK 239
Score = 23.8 bits (49), Expect(2) = 0.14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 188 RVPEESPEVCRASRAEHPEPEVP 120
++ ++ P RASRA EP+ P
Sbjct: 235 KLGDKGPAAARASRAAAEEPQAP 257
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 0.93
Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -3
Query: 431 KQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
++ ETI Q + +E ++S +E+E +KE + + + + + + D + +
Sbjct: 509 EKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQHKRSSRKLLYEDKQAIQEA 567
Query: 254 RSMSTSRKNWKAFTI 210
+++T RK W T+
Sbjct: 568 HTINTKRKLWPQSTL 582
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.5 bits (58), Expect = 0.93
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMED----EKLKEKISDSDKQTILDKCND-TIKWLDSNQ 267
K +T++A N S K + EK++EK+++ DK ++ D D IK ++
Sbjct: 761 KNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSV 820
Query: 266 LADKRSMS--TSRKNWKAFTIR*LRRCTRVPEESPEVCRASRA---EHPEPEVPPPGLEA 102
RS+S T K K I + + + E SP C S A + E EV L +
Sbjct: 821 QNGTRSVSKNTPEKETKVDKIDNVSK--KDVETSPGSCETSSAFAKTYAEKEVTSINLPS 878
Query: 101 LAPPSRRSIKPTFHTTLKPTCNN 33
+ P S + P C +
Sbjct: 879 VRKPLDESYYDHSISPFDPLCQS 901
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 1.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 422 ETIQAKNALESYCFSMKSTMED 357
ET+ KNALE Y + ++ ++D
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 2.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 179 EESPEVCRASRAEHPEPE 126
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 3.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 354 EAQGKDL*L*QADHPRQVQRHHQVAG-FQPAGRQEEYEHKQKELEGIYNPIITKMY 190
E GKD + DH + + G FQ AG+ + L+G+Y+ IITK+Y
Sbjct: 239 ELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLY 294
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 3.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 407 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 282
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 5.0
Identities = 7/29 (24%), Positives = 18/29 (62%)
Frame = -3
Query: 365 MEDEKLKEKISDSDKQTILDKCNDTIKWL 279
+++++++ K+S D L+ CN+ + L
Sbjct: 260 LKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 185 VPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRS 78
V +SP R SR P E P A PPSRR+
Sbjct: 891 VSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.0 bits (52), Expect = 5.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 425 KETIQAKNALESYCFSMKST 366
K+TI KNA++ Y S+K T
Sbjct: 260 KQTILTKNAIQDYLVSLKIT 279
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 140 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 18
H +P +L+PPS R++KP H+ P+ + L S
Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEPS 208
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 380 SMKSTMEDEKLKEKISD 330
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 207
Score = 24.2 bits (50), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 107 EALAPPSRRSIKPTFH 60
+ L P +RSIKP FH
Sbjct: 142 QTLIPSQQRSIKPPFH 157
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 356 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKNWKAFTI 210
+K+ E+ +D +ILD C++ I NQ+ + S S K I
Sbjct: 139 DKVNERSTDDLTSSILDACDEEILVDARNQIKNWLSSELSHSTSKYLNI 187
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 24.2 bits (50), Expect = 8.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 137 PEPEVPPPGLEALAPP 90
P P PPPG+ PP
Sbjct: 761 PPPPPPPPGVAGAGPP 776
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,660,826
Number of Sequences: 5004
Number of extensions: 31139
Number of successful extensions: 147
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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