BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0798.Seq (433 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 65 5e-12 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 60 1e-10 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 52 5e-08 SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|... 31 0.100 SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 25 0.14 SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 0.93 SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 0.93 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 1.6 SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 2.2 SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 25 3.8 SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 3.8 SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 5.0 SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 5.0 SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 5.0 SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 6.6 SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 6.6 SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 24 8.7 SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 24 8.7 SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 24 8.7 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 64.9 bits (151), Expect = 5e-12 Identities = 28/62 (45%), Positives = 42/62 (67%) Frame = -3 Query: 416 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTS 237 IQAKN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAK 593 Query: 236 RK 231 +K Sbjct: 594 QK 595 Score = 36.3 bits (80), Expect = 0.002 Identities = 14/24 (58%), Positives = 20/24 (83%) Frame = -2 Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187 ++E+E KQKELE + NPI+ K+YQ Sbjct: 587 KDEFEAKQKELESVANPIMAKIYQ 610 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 60.5 bits (140), Expect = 1e-10 Identities = 27/62 (43%), Positives = 40/62 (64%) Frame = -3 Query: 416 IQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTS 237 IQAKN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K Sbjct: 534 IQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDK 593 Query: 236 RK 231 +K Sbjct: 594 QK 595 Score = 40.7 bits (91), Expect = 9e-05 Identities = 16/24 (66%), Positives = 21/24 (87%) Frame = -2 Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187 ++EYE KQKELEG+ NPI+ K+YQ Sbjct: 587 KDEYEDKQKELEGVANPIMAKIYQ 610 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 51.6 bits (118), Expect = 5e-08 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 425 KETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKR 252 KE I+A+N LE+Y +S+K +D E+L K+ DKQ +LD D +WL+ + A K Sbjct: 561 KERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKE 620 Query: 251 SMSTSRKNWKA 219 R+ A Sbjct: 621 EFEDQRQKLDA 631 Score = 25.8 bits (54), Expect = 2.8 Identities = 8/23 (34%), Positives = 18/23 (78%) Frame = -2 Query: 258 QEEYEHKQKELEGIYNPIITKMY 190 +EE+E ++++L+ + +PI K+Y Sbjct: 619 KEEFEDQRQKLDAVVHPITQKLY 641 >SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 440 Score = 30.7 bits (66), Expect = 0.100 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 291 HQVAGFQPAGRQEEYEHKQKEL 226 H + GFQP+ RQE+Y+H +L Sbjct: 290 HHLNGFQPSQRQEDYKHTMVDL 311 >SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Schizosaccharomyces pombe|chr 1|||Manual Length = 272 Score = 25.0 bits (52), Expect(2) = 0.14 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -3 Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255 +++ + A AL + E+ I +K T+ D+ NDT +WLD +L DK Sbjct: 184 REELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLGDK 239 Score = 23.8 bits (49), Expect(2) = 0.14 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 188 RVPEESPEVCRASRAEHPEPEVP 120 ++ ++ P RASRA EP+ P Sbjct: 235 KLGDKGPAAARASRAAAEEPQAP 257 >SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 633 Score = 27.5 bits (58), Expect = 0.93 Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -3 Query: 431 KQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255 ++ ETI Q + +E ++S +E+E +KE + + + + + + D + + Sbjct: 509 EKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQHKRSSRKLLYEDKQAIQEA 567 Query: 254 RSMSTSRKNWKAFTI 210 +++T RK W T+ Sbjct: 568 HTINTKRKLWPQSTL 582 >SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 997 Score = 27.5 bits (58), Expect = 0.93 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 10/143 (6%) Frame = -3 Query: 431 KQKETIQAKNALESYCFSMKSTMED----EKLKEKISDSDKQTILDKCND-TIKWLDSNQ 267 K +T++A N S K + EK++EK+++ DK ++ D D IK ++ Sbjct: 761 KNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSV 820 Query: 266 LADKRSMS--TSRKNWKAFTIR*LRRCTRVPEESPEVCRASRA---EHPEPEVPPPGLEA 102 RS+S T K K I + + + E SP C S A + E EV L + Sbjct: 821 QNGTRSVSKNTPEKETKVDKIDNVSK--KDVETSPGSCETSSAFAKTYAEKEVTSINLPS 878 Query: 101 LAPPSRRSIKPTFHTTLKPTCNN 33 + P S + P C + Sbjct: 879 VRKPLDESYYDHSISPFDPLCQS 901 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 26.6 bits (56), Expect = 1.6 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 422 ETIQAKNALESYCFSMKSTMED 357 ET+ KNALE Y + ++ ++D Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596 >SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces pombe|chr 1|||Manual Length = 270 Score = 26.2 bits (55), Expect = 2.2 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 179 EESPEVCRASRAEHPEPE 126 EE+P AS EHPEP+ Sbjct: 244 EEAPAAAAASENEHPEPK 261 >SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 522 Score = 25.4 bits (53), Expect = 3.8 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 354 EAQGKDL*L*QADHPRQVQRHHQVAG-FQPAGRQEEYEHKQKELEGIYNPIITKMY 190 E GKD + DH + + G FQ AG+ + L+G+Y+ IITK+Y Sbjct: 239 ELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCIGIERIIALDGVYDTIITKLY 294 >SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces pombe|chr 1|||Manual Length = 411 Score = 25.4 bits (53), Expect = 3.8 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -3 Query: 407 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 282 K E YC S+ ST + + K +SD T+L T+ W Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323 >SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 506 Score = 25.0 bits (52), Expect = 5.0 Identities = 7/29 (24%), Positives = 18/29 (62%) Frame = -3 Query: 365 MEDEKLKEKISDSDKQTILDKCNDTIKWL 279 +++++++ K+S D L+ CN+ + L Sbjct: 260 LKEQEIRRKVSSDDVHNYLESCNNHLSML 288 >SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizosaccharomyces pombe|chr 2|||Manual Length = 932 Score = 25.0 bits (52), Expect = 5.0 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Frame = -3 Query: 185 VPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRS 78 V +SP R SR P E P A PPSRR+ Sbjct: 891 VSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928 >SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizosaccharomyces pombe|chr 2|||Manual Length = 872 Score = 25.0 bits (52), Expect = 5.0 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -3 Query: 425 KETIQAKNALESYCFSMKST 366 K+TI KNA++ Y S+K T Sbjct: 260 KQTILTKNAIQDYLVSLKIT 279 >SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pombe|chr 3|||Manual Length = 534 Score = 24.6 bits (51), Expect = 6.6 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -3 Query: 140 HPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 18 H +P +L+PPS R++KP H+ P+ + L S Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEPS 208 >SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual Length = 534 Score = 24.6 bits (51), Expect = 6.6 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -3 Query: 380 SMKSTMEDEKLKEKISD 330 S+K MEDEKL EK+++ Sbjct: 114 SLKLIMEDEKLIEKVNE 130 >SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Schizosaccharomyces pombe|chr 1|||Manual Length = 207 Score = 24.2 bits (50), Expect = 8.7 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 107 EALAPPSRRSIKPTFH 60 + L P +RSIKP FH Sbjct: 142 QTLIPSQQRSIKPPFH 157 >SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces pombe|chr 2|||Manual Length = 427 Score = 24.2 bits (50), Expect = 8.7 Identities = 14/49 (28%), Positives = 23/49 (46%) Frame = -3 Query: 356 EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKNWKAFTI 210 +K+ E+ +D +ILD C++ I NQ+ + S S K I Sbjct: 139 DKVNERSTDDLTSSILDACDEEILVDARNQIKNWLSSELSHSTSKYLNI 187 >SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||Manual Length = 1461 Score = 24.2 bits (50), Expect = 8.7 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 Query: 137 PEPEVPPPGLEALAPP 90 P P PPPG+ PP Sbjct: 761 PPPPPPPPGVAGAGPP 776 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,660,826 Number of Sequences: 5004 Number of extensions: 31139 Number of successful extensions: 147 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 146 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 154067960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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