Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0798.Seq
(433 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 91 5e-19
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 4e-16
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 64 4e-11
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 64 5e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 32 0.17
SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28) 31 0.31
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 1.2
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 1.2
SB_1024| Best HMM Match : Ank (HMM E-Value=0) 29 1.6
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_43944| Best HMM Match : NLE (HMM E-Value=8) 29 2.2
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 28 2.8
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 28 2.8
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 3.8
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 27 5.0
SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) 27 5.0
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10) 27 5.0
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 27 5.0
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_8472| Best HMM Match : TatC (HMM E-Value=1.4) 27 5.0
SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 27 6.6
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 27 6.6
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 6.6
SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19) 27 6.6
SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0) 27 8.7
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 90.6 bits (215), Expect = 5e-19
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
KQ++ IQ KN+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC + +KWLD+NQ A+K
Sbjct: 533 KQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKD 592
Query: 251 SMSTSRK 231
+K
Sbjct: 593 EFEYHQK 599
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++E+E+ QKELE + NPIITK+YQ
Sbjct: 591 KDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 81.0 bits (191), Expect = 4e-16
Identities = 32/65 (49%), Positives = 50/65 (76%)
Frame = -3
Query: 425 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSM 246
+E IQ+KN+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+K +
Sbjct: 627 RERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEI 686
Query: 245 STSRK 231
+K
Sbjct: 687 DAHQK 691
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -2
Query: 267 AGRQEEYEHKQKELEGIYNPIITKMYQ 187
+ +EE + QKELEG+ NPIITK+YQ
Sbjct: 680 SAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 64.5 bits (150), Expect = 4e-11
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
K KE ++A+N LESY +S+K+ + D EKL K+S+ DK+TI + I W+D NQ A
Sbjct: 1226 KTKEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASV 1285
Query: 254 RSMSTSRKNWK 222
++ WK
Sbjct: 1286 EDFKKEKRKWK 1296
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 64.1 bits (149), Expect = 5e-11
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRS 249
Q+E I A+N LESY F +KS + + L+ K+S SDK T+ +K + + WL+ N LA+K
Sbjct: 533 QREKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEE 592
Query: 248 MSTSRK 231
K
Sbjct: 593 FEEQEK 598
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMY 190
+EE+E ++KEL+ + +PI+ K++
Sbjct: 590 KEEFEEQEKELQRVCSPIMAKVH 612
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.008
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -3
Query: 413 QAKNALESYCFSMKSTMEDEKLKEKIS-DSDKQTILDKCNDTIKWLDSN 270
+AKNALES+ F ++ M E L EK+S +++++TI + WLD +
Sbjct: 718 RAKNALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASDWLDED 765
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 32.3 bits (70), Expect = 0.17
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
K++E Q + E +++ + E LKE + + +K+TI D L+ ++ +K
Sbjct: 195 KERERRQQEFIKEQKDVAVQQKAQQESLKETLQEQEKETIQQLEEDFKAQLNELEV-EKA 253
Query: 251 SMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRA-SRAEHPEPEVPPPGLEALAPPSRRS 78
T+ + K+FT++ + +RV + ++ A +R E E +E + R++
Sbjct: 254 KEQTALEEMKSFTVKSIILFSRVYSKYKDILEARNRQRKREREEELERIERVEEMQRKT 312
>SB_25234| Best HMM Match : SMC_hinge (HMM E-Value=3.7e-28)
Length = 552
Score = 31.5 bits (68), Expect = 0.31
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRS 249
QKE QA +E Y S++ E KE + S+K+ + ++C + IK +L D +
Sbjct: 22 QKEVTQASENIEKYSQSIRDLGE----KENVLTSEKKQLEEECQENIKQRTKLEL-DIKD 76
Query: 248 MSTS 237
+ TS
Sbjct: 77 LETS 80
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 212 IR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPS 87
IR + R PE+ EV S + P L+ L PPS
Sbjct: 20 IRNIMSRRRFPEDDLEVSSVSASASSSTSRPTNALQPLKPPS 61
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 101 LAPPSRRSIKPTFHTTLKPTCNNH 30
L PPSR+S P HT P+C ++
Sbjct: 80 LTPPSRQSNNPRPHT--PPSCQSN 101
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 137 PEPEVPPPGLEALAPPSRRSIKP-TFHTTLKPTCNNHLVTSP 15
P+P+ PPPG PPS + P T +P VT P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQP 69
>SB_1024| Best HMM Match : Ank (HMM E-Value=0)
Length = 891
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 182 PEESP--EVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 66
PE+ P EV A R E P+ E PP +PP ++ KPT
Sbjct: 771 PEQPPIGEVESAVRREQPKSEKTPPSTTP-SPPPKQPSKPT 810
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 173 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 18
S + C A+ P + L+ P S S +PT TL CNN TS
Sbjct: 417 SEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGCNNFTTTS 468
>SB_43944| Best HMM Match : NLE (HMM E-Value=8)
Length = 359
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 228 ILSACAHTPLVGQLVGIQPLDGVVALVED-GLLVRVRDLFLELLILH 365
+L A TP+ I PL + + ED RVRD+F E L+ H
Sbjct: 175 LLYAVPATPVESTASDITPLLTQLEMAEDKSFTTRVRDIFKETLVTH 221
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = -3
Query: 398 LESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKNWKA 219
++S +++ ++D K + + Q + KC+ K L A +++ + S +
Sbjct: 265 MQSTIMTLQQQIKDIKQRLATETTTSQELRTKCHQVEKCLSE---AKEQNATLSLSLQQR 321
Query: 218 FTIR*LRRCTRVPEESPEVCRASRA-EHPEPEVPPPGLEALAPPSRRS 78
+ + + E P V + R E +P PPP APP ++
Sbjct: 322 LESKDTKDDEPMEIEPPNVTKPDRTTEQTQPSPPPPETVTTAPPLHKT 369
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 161 CRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 42
C A A+ P+ +VPPP APP + P TT PT
Sbjct: 92 CNAKPAQ-PDTDVPPPPATTSAPPPPTTTAPP-ATTSPPT 129
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -3
Query: 173 SPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 15
S + C A+ P + L+ P S S +PT TL CNN TSP
Sbjct: 84 SEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGCNN-FTTSP 135
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -3
Query: 185 VPEESPEVCRASRAEHPEPEVPP----PGLEALAPPSRRSIKPT-FHTTL--KPTCNNHL 27
VP ++P ++S A +P P+ PP A P ++ S PT +TL P+ H
Sbjct: 789 VPTQAPTEMKSSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGENPSPTTHY 848
Query: 26 VTSP 15
T P
Sbjct: 849 ATKP 852
>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 374 KSTMEDEKLKEKISDSDKQTILDKCNDT-IKWLDSNQLADKRSMST 240
+S EDEK+ SDS+ + LD C+ T ++ L QL D S ST
Sbjct: 257 RSASEDEKISLHFSDSEGSSSLDHCSLTGLEKL--LQLRDSASSST 300
>SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1489
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = -3
Query: 257 KRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGL----EALAPP 90
+R + TS+ K R L+ R P + R + HP+ PP + AL
Sbjct: 1159 QRQLQTSKSTTKTQLPRILQTTGRQPVVISQEPRGVKRSHPDTPEPPKVVTRIKTALMQD 1218
Query: 89 SRRSIKPTFHTTLK 48
+ P FHT K
Sbjct: 1219 QHSVLHPDFHTPFK 1232
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 137 PEPEVPPPGLE-ALAPPSRRSIKPTFH 60
P P PPP L A APP R P H
Sbjct: 425 PPPPPPPPALRLACAPPRLRFTSPVLH 451
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 27.5 bits (58), Expect = 5.0
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -3
Query: 359 DEKLKEKISDSDKQTILDKCND 294
D +++ ++ D D+QT+ D C+D
Sbjct: 378 DVEVRRRVQDIDRQTVTDDCDD 399
>SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33)
Length = 2822
Score = 27.5 bits (58), Expect = 5.0
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = -3
Query: 362 EDEKLKEKIS-DSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKNWKAFTIR*LRRCTR 186
+D+ L E D D D+ ND D + + T R+ W + +
Sbjct: 1577 DDDDLPEPDDEDEDDDDDEDEENDEENEDDYDLSEEVERPGTRRRTWDDEFVLKRQFSAL 1636
Query: 185 VPEESPEVCRASRAEHPEPEVPPPGLEALAPP 90
VP P R + + + EVPPPG + + P
Sbjct: 1637 VPAFDPRPGRTNVQQTQDIEVPPPGSKRPSTP 1668
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 123 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAH 248
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1140 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1177
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 123 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAH 248
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1177 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1214
>SB_41185| Best HMM Match : RVT_1 (HMM E-Value=1.7e-10)
Length = 1118
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 350 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
+KEK+S+ ++ I+ K + W+ S L DKR
Sbjct: 365 VKEKLSEMEQDGIIVKEEEHTPWVSSMLLVDKR 397
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHT 57
P + P R SR E P PE PP L+ LA P+ + +P+ T
Sbjct: 19 PAKKPPPRRRSR-ETP-PETPPVQLKHLAGPAEKPHRPSRET 58
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 188 RVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 45
RVP R P P+VPPPG AP R +H L P
Sbjct: 580 RVPPPGTPHPRVPPPGAPHPKVPPPG----APYQRLPYSGAYHPRLPP 623
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = -3
Query: 422 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMS 243
E + L+ + M + E E +KE + +++++ KC +T K LD+++ D+
Sbjct: 1059 EAVDEAKTLKESLYRMVN--EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQEDEE 1116
Query: 242 TSRK 231
R+
Sbjct: 1117 VQRE 1120
>SB_8472| Best HMM Match : TatC (HMM E-Value=1.4)
Length = 476
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 233 KNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVP 120
KN+ ++ L R P+E ++ SR PEP P
Sbjct: 8 KNFDEVVVQLLMRMYEPPDEGSDIATFSRESDPEPNPP 45
>SB_37239| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 690
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 350 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
+KEK+S+ ++ I+ K + W+ S + DKR
Sbjct: 174 VKEKLSEMEQDGIIVKDKEQTPWVSSMLVVDKR 206
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -3
Query: 194 CTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPP 90
C +P P P P PPPG L PP
Sbjct: 722 CAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPP 756
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.1 bits (57), Expect = 6.6
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK- 255
K+KE + ++ L + E K++++ + DKQ +K D++K + + +DK
Sbjct: 975 KEKERLLQEDKLHEKEEKDRKDKEKRKVEKEKREKDKQVEKEK-KDSLKRVKKRKDSDKE 1033
Query: 254 RSMSTSRKNWKAFTIR*LRRCTRVP--------EESPEVCRASRAEHPEPEVPPPGLEAL 99
R + + K + + T V EESP R + +E P+ L
Sbjct: 1034 RKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAGSVSALLSVF 1093
Query: 98 APPSRRSIKPTFHTTLK 48
A + +KP + K
Sbjct: 1094 ATEPSKPLKPAIRYSRK 1110
>SB_17208| Best HMM Match : RVT_1 (HMM E-Value=6.4e-19)
Length = 1053
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 350 LKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
+KEK+S+ ++ I+ K + W+ S + DKR
Sbjct: 660 VKEKLSEMEQDGIIVKDKEQTPWVSSMLVVDKR 692
>SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 248 MSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASR 147
+ T+++N + IR LR+C P E RASR
Sbjct: 6 VETTQRNTRRQNIRSLRKCRNAPVEQKGCRRASR 39
>SB_24280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 191 TRVPEESPEVCRASRAEHPEPEVPPPGLE--ALAPPS--RRSIKPTFHTTLKPT 42
T VP++ PE + PEP + P E A P S RRS +P H T
Sbjct: 1244 TTVPKQIPEEFKEPEITVPEPSLEPKKTELPASEPASTLRRSTRPKPHLLTSKT 1297
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 380 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSR 234
S K ++ +K ++ D +K+ +++C TIK LDSN L D R R
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSN-LKDLRQQVADR 219
>SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0)
Length = 911
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 146 AEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 18
+E P P P A PPSR S++P T+L +N L+ +
Sbjct: 814 SEFPAPTEEPCTTTAQRPPSRPSLEP-LATSLFNVLDNELIAA 855
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLK 48
P +P RA+ P+P V P A APP R P HT K
Sbjct: 220 PRPAPARDRAASGPGPKPAVKPRDRLATAPPGR---PPAPHTREK 261
>SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 159 AYLRGLLRHPGTSS*LSDCKC-LPIL-SACAHTPLV 260
AY G+ PGTS +SD C LP+L S TP+V
Sbjct: 99 AYKNGICTRPGTSP-VSDSSCYLPVLYSKETQTPVV 133
>SB_27917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4554
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 266 LADKRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEV 123
+ D ++T+ N ++ I L +P++S E+C ASR P EV
Sbjct: 3471 IRDSLLVTTNNPNERSVIIDTLIDTNILPDKSGELCPASRFHDPANEV 3518
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,368,244
Number of Sequences: 59808
Number of extensions: 282294
Number of successful extensions: 1375
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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