Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0798.Seq
(433 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 87 4e-18
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 86 9e-18
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 56 1e-08
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 56 1e-08
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 52 1e-07
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 51 4e-07
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.15
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.15
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 30 0.82
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 30 0.82
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 0.82
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 0.82
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 0.82
Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical p... 29 1.1
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 1.4
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 29 1.9
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 1.9
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 2.5
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 28 2.5
U53338-7|AAA96195.2| 342|Caenorhabditis elegans Lunapark (membr... 28 2.5
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 28 2.5
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 28 2.5
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 28 2.5
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 2.5
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 3.3
Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z46794-2|CAA86774.1| 950|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 27 4.4
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 27 5.8
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 27 5.8
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 27 5.8
L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor pr... 27 5.8
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 27 5.8
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 27 5.8
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 27 5.8
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 27 5.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 27 7.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 27 7.7
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ... 27 7.7
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/67 (56%), Positives = 51/67 (76%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRS 249
QK+ I AKN LESY F++K T+EDEKLK+KIS DK+ I DKC++ +KWLDSNQ A+K
Sbjct: 533 QKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEE 592
Query: 248 MSTSRKN 228
+ +K+
Sbjct: 593 FESQQKD 599
Score = 33.1 bits (72), Expect = 0.088
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
+EE+E +QK+LEG+ P ++K+YQ
Sbjct: 590 KEEFESQQKDLEGLAKPDLSKLYQ 613
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 86.2 bits (204), Expect = 9e-18
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRS 249
QK+ I AKN LESY F++K T+EDEKLK+KIS DK+ I DKC++ +KWLDSNQ A+K
Sbjct: 533 QKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEE 592
Query: 248 MSTSRKN 228
+K+
Sbjct: 593 FEHQQKD 599
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
+EE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 590 KEEFEHQQKDLEGLANPIISKLYQ 613
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
K K+ +A+N LESY +++K+ +ED EKL K+ + DK+TI + + I WL SN A
Sbjct: 559 KVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASA 618
Query: 254 RSMSTSRKN 228
+ +K+
Sbjct: 619 EELKEQKKD 627
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
K K+ +A+N LESY +++K+ +ED EKL K+ + DK+TI + + I WL SN A
Sbjct: 559 KVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASA 618
Query: 254 RSMSTSRKN 228
+ +K+
Sbjct: 619 EELKEQKKD 627
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
+Q+E +QA+N LE+Y F +K +++ K+S D + ++T++WLDSN LA+K
Sbjct: 532 EQRERVQARNQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKD 589
Query: 251 SMSTSRKNWKA 219
+ K K+
Sbjct: 590 EIEAKDKELKS 600
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++E E K KEL+ + I+TKM+Q
Sbjct: 588 KDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
+Q+E +QA+N LE+Y F +K +++ K+S D + ++T++WLDSN LA+K
Sbjct: 532 EQRERVQARNQLEAYAFQIKQALDE--YSSKLSTEDASRAKEAVDETLRWLDSNSLAEKD 589
Query: 251 SMSTSRKNWKA 219
+ K K+
Sbjct: 590 EIEAKDKELKS 600
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++E E K KEL+ + I+TKM+Q
Sbjct: 588 KDEIEAKDKELKSVCQSILTKMHQ 611
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
QKE ++++N LE+Y + MK+ + D EKL K++D DK +I I+WL SNQ A
Sbjct: 557 QKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTE 616
Query: 251 SMSTSRK 231
+K
Sbjct: 617 ENKEQKK 623
Score = 29.9 bits (64), Expect = 0.82
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 303 VQRHHQVAGFQPAGRQEEYEHKQKELEGIYNPIITKMY 190
V+R + G EE + ++KELE + PI++K+Y
Sbjct: 600 VERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 50.8 bits (116), Expect = 4e-07
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKR 252
QKE ++++N LE+Y + +K+ + D EKL K++D DK +I I+WL SNQ A
Sbjct: 188 QKEKVESRNELEAYAYQIKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTE 247
Query: 251 SMSTSRK 231
+K
Sbjct: 248 ENKEQKK 254
Score = 29.9 bits (64), Expect = 0.82
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 303 VQRHHQVAGFQPAGRQEEYEHKQKELEGIYNPIITKMY 190
V+R + G EE + ++KELE + PI++K+Y
Sbjct: 231 VERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/70 (31%), Positives = 38/70 (54%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRS 249
Q++ I ++N LE+Y F +K +E+ +S D + D DT++W++ N LADK
Sbjct: 533 QRDRISSRNQLEAYAFQVKQALEEHG--SLLSAEDAKRAKDAVEDTLRWMERNTLADKDE 590
Query: 248 MSTSRKNWKA 219
+ K K+
Sbjct: 591 IEAKDKELKS 600
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 258 QEEYEHKQKELEGIYNPIITKMYQ 187
++E E K KEL+ I I+TKM+Q
Sbjct: 588 KDEIEAKDKELKSICQDILTKMHQ 611
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 143 EHPEPEVPPPGLEALAPPSRRSIKPTF 63
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.15
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 143 EHPEPEVPPPGLEALAPPSRRSIKPTF 63
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 155 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 54
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.9 bits (64), Expect = 0.82
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 155 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 54
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 0.82
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -3
Query: 428 QKETIQAKNALES--YCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD- 258
Q E K + ES CF +K T +EKLK ++ DK+ + K +K L + +
Sbjct: 344 QLEVDDLKKSFESDKECFLLKMTSLEEKLKS--AEEDKKLAVKKAMSLVKELQKSLKEER 401
Query: 257 KRSMSTSRKN 228
KR+ S RK+
Sbjct: 402 KRADSYERKS 411
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 173 SPEVCRASRAEH-PEPEVPPPGLEALAPP 90
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.82
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 173 SPEVCRASRAEH-PEPEVPPPGLEALAPP 90
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical
protein F44F4.10 protein.
Length = 280
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 407 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKN 228
K+ +S C + K +DE + + S ++ + +K D ++ L+ + KR S RK
Sbjct: 64 KSKPDSQCSNGKKPADDEYVNLLLPQSKEEQVAEKLADKLRKLEVKESKGKRRGSKERKK 123
Query: 227 WK 222
K
Sbjct: 124 KK 125
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 191 TRVPEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 75
+R P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1408 SRQPSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 168 RGLLRHPGTSS*LSDCKCLPILSACAHTPLVGQLVGIQPLDGVVALVEDGLLVRVRDLFL 347
R L+R P +S C+ +L A+T + G+ LDG A G + VRD+
Sbjct: 54 RELIRMPEEYI-MSSKACIYVLGGAANTAALFDFDGVYILDGGFAEKNPGFVAHVRDVSA 112
Query: 348 ELL 356
LL
Sbjct: 113 VLL 115
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = -3
Query: 422 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD 258
E +N LES+ F +E+ + + ++D +K + D WL+ + D
Sbjct: 692 ERAAVENELESFNFECSQYLEETEFTDYMADEEKTKLEDSVKRIRAWLEDDVTKD 746
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 LSDCKCLPILSACAHTPLVGQLVGIQPLDGVVALVEDGLLVRVRDLFLELL 356
+S C+ +L A+T + G+ LDG A G + VRD+ LL
Sbjct: 7 MSSKACIYVLGGAANTAALFDFDGVYILDGGFAEKNPGFVAHVRDVSAVLL 57
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 LSDCKCLPILSACAHTPLVGQLVGIQPLDGVVALVEDGLLVRVRDLFLELL 356
+S C+ +L A+T + G+ LDG A G + VRD+ LL
Sbjct: 7 MSSKACIYVLGGAANTAALFDFDGVYILDGGFAEKNPGFVAHVRDVSAVLL 57
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 LSDCKCLPILSACAHTPLVGQLVGIQPLDGVVALVEDGLLVRVRDLFLELL 356
+S C+ +L A+T + G+ LDG A G + VRD+ LL
Sbjct: 7 MSSKACIYVLGGAANTAALFDFDGVYILDGGFAEKNPGFVAHVRDVSAVLL 57
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 410 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 285
++NA++ Y SM + +DE LK K+ D + C T+K
Sbjct: 263 SRNAIQEYVSSMSTHFKDEILKAKLPPMDASRFI--CGVTLK 302
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 42
P P + +A P P PPP L+A PP +K + PT
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 389 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 282
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 389 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 282
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 204 LSDCKCLPILSACAHTPLVGQLVGIQPLDGVVALVEDGLLVRVRDLFLELL 356
+S C+ +L A+T + G+ LDG A G + VRD+ LL
Sbjct: 87 MSSKACVYVLGGAANTATLFDFDGVYILDGGFAEKSPGFVAHVRDVSAVLL 137
>U53338-7|AAA96195.2| 342|Caenorhabditis elegans Lunapark (membrane
protein) homologprotein 1 protein.
Length = 342
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -3
Query: 383 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADK 255
FS ++ +KL+ IS K T+LD +T+K+ ++ ++ D+
Sbjct: 93 FSWRTNRTTQKLENAISQ--KTTLLDLVKETLKFKEAKEILDR 133
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 36 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 188
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 36 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 188
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +3
Query: 36 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 188
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 389 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 282
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 149 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 54
R E P P P G + A +RR I+P+ TT
Sbjct: 308 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 339
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 149 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 54
R E P P P G + A +RR I+P+ TT
Sbjct: 551 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 582
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 428 QKETIQAKNALESY-CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQ 267
Q + A + LE+ ++ + +ED+ + +IS S D+ +D+I+ L SNQ
Sbjct: 24 QSARLTATDVLETVQIYNNEYALEDDHITYEISTSPPSNSFDQISDSIRILLSNQ 78
>Z82076-5|CAB04935.2| 307|Caenorhabditis elegans Hypothetical
protein W07G1.3 protein.
Length = 307
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 158 RASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 15
R + PEP VPP APP+ S+ P F + + HL++ P
Sbjct: 23 RKRSSSKPEPPVPPK----FAPPAAPSVAPNFRAS--DSAAPHLLSVP 64
>Z46794-2|CAA86774.1| 950|Caenorhabditis elegans Hypothetical protein
R06F6.2 protein.
Length = 950
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 428 QKETIQAKNALESYCFSMKSTMEDEKLKE-KISDSDKQTI-LDKCNDTIKWLDSNQLAD- 258
QKE +A N +E ++ + DEK K+ K S++ K + + T D +++
Sbjct: 830 QKELAEASNGMELIAMYLQRGLFDEKTKKTKKSEAKKDPFSTGRASTTTNPFDDDEVTTI 889
Query: 257 KRSMSTSRKN 228
R+MST N
Sbjct: 890 SRTMSTVSSN 899
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 200 RRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 66
R R+ E EV P + PPPG++ +P +R+ PT
Sbjct: 207 RHQPRMYHEDVEVRVDEMPMWPMNDSPPPGMQQQSPERQRAFSPT 251
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -3
Query: 254 RSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAP---PSR 84
R+ S K W+ R + E SP+V RA R PPP + +AP P R
Sbjct: 37 RASELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVAPIRLPER 90
Query: 83 RSIK 72
R ++
Sbjct: 91 RPLR 94
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -3
Query: 254 RSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAP---PSR 84
R+ S K W+ R + E SP+V RA R PPP + +AP P R
Sbjct: 37 RASELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVAPIRLPER 90
Query: 83 RSIK 72
R ++
Sbjct: 91 RPLR 94
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 200 RRCTRVPEESPEVCRASRAEHPEPEV---PPPGLEALAPPSRRSIKPTFHTTLKPTCNNH 30
R+ TR P++ + A + PPP + + PS + T HTT PT N+
Sbjct: 1318 RKVTRAPKKQTSRSKKESASNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNY 1375
Query: 29 L 27
L
Sbjct: 1376 L 1376
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 27.1 bits (57), Expect = 5.8
Identities = 22/99 (22%), Positives = 39/99 (39%)
Frame = -3
Query: 407 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKRSMSTSRKN 228
K+A E + E + KE+ S DK++ +K + K +N++ +KN
Sbjct: 575 KSAKEGKAEIKEKNREKKDAKEESSSDDKKSTDEKKKEIKKIEKTNKVNHDEPKKEEKKN 634
Query: 227 WKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPG 111
+ L T V ++ AS E P+ + G
Sbjct: 635 EEQVKETKLESSTTVAKKEDVTTVASTTEEPKSDKDSEG 673
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -3
Query: 200 RRCTRVPEESPEVCRASRAEHPEPEV---PPPGLEALAPPSRRSIKPTFHTTLKPTCNNH 30
R+ TR P++ + A + PPP + + PS + T HTT PT N+
Sbjct: 1318 RKVTRAPKKQTSRSKKESASNSRDSTHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNY 1375
Query: 29 L 27
L
Sbjct: 1376 L 1376
>L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor
protein.
Length = 744
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 324 QADHPRQVQRHHQVAGFQPA-GRQEEYEHKQKELEGIYNPIITKMY 190
Q D P Q QV GF P GR Y +KE + II Y
Sbjct: 523 QTDEPPNYQMPFQVIGFDPTIGRMRNYVVSKKERPQWRDEIIKHEY 568
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 15
P P+ R + P +PPPG +P R I P+ H V P
Sbjct: 101 PNVMPDRVAGPRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHP 156
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 15
P P+ R + P +PPPG +P R I P+ H V P
Sbjct: 101 PNVMPDRVAGPRIINAIPGLPPPGFIFQSPAFARMIPGNVEIPTPPSQTQHTVVHP 156
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 27.1 bits (57), Expect = 5.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 431 KQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADK 255
++K AKN+LE Y + M+ + D+ E I+ + T WL D + A++
Sbjct: 569 REKAKADAKNSLEEYVYEMRDKVSDQ-YAEFITPAAADEFRSVLTSTEDWLYDEGEDAER 627
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 188 RVPEESPEV-CRASRAEHPEPEVPPPGLEALAPP-SRRSIKPT 66
++P SP A+R + PE +P P A +PP SRRS+ T
Sbjct: 341 QLPRNSPAANATAAREDAPEASIPAP---APSPPASRRSVSRT 380
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 90
P SP+ S++ P P +PP + PP
Sbjct: 476 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 167 EVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNN 33
E+ SRA+ P P+ P PP +R P T L+P N
Sbjct: 384 EITMKSRAQPPPPQYNQPS----EPPPKRVSSPIDRTLLEPYIKN 424
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 413 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 315
Q + E+ C+S K EDE L + + D++T
Sbjct: 639 QCETCQEASCYSYKDVPEDELLDDSDDEYDEET 671
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 182 PEESPEVCRASRAEHPEPEVPPPGLEALAPP 90
P SP+ S++ P P +PP + PP
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 170 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTL 51
P+V R +R HPE PPG + + PT HT L
Sbjct: 13 PKVPRLARQSHPE----PPGPSSSTSSTPLFTDPTIHTIL 48
>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
protein F28H6.4 protein.
Length = 1000
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 278 DSNQLADKRSMSTSRKNWKAFT 213
DS+ + SM+ R+NWKAFT
Sbjct: 194 DSDPEETELSMAPHRRNWKAFT 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,553,790
Number of Sequences: 27780
Number of extensions: 198959
Number of successful extensions: 1104
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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