Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0797.Seq
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    72   1e-14
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   0.88 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   2.0  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   2.7  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   3.6  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   6.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   8.2  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 71.7 bits (168), Expect = 1e-14
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = +2

Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409
           L +  K  +YIRIQR +A+L + LK+PP INQFTQTLDK  A  + K  +KYRPE     
Sbjct: 57  LSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRPENPIAR 116

Query: 410 KERLXKAAE 436
            +RL   AE
Sbjct: 117 VQRLKAKAE 125



 Score = 57.6 bits (133), Expect = 2e-10
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254
           NPLFEKR KN+ IGQ +QP RDLSRFV+WP
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLSRFVKWP 64


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 240 IWTSHELAECPDQ*QSSLASSQREDSQFSWAQPF*PPMGRR 118
           +WT+  +  CP Q Q  L   Q++  Q    + + PP  R+
Sbjct: 419 LWTT-VVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQ 458


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 403  CFSLRPVFLQNLEKAXSXSLVQCLGKLVDRRGH 305
            CF  + V ++ +    S + +  L + V RRGH
Sbjct: 1454 CFVTKAVHIELVSNLTSSAFLAALRRFVARRGH 1486


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 436 FSSFXQPLFXGCFSLRPVFLQNL 368
           F  F QP+F  C+ L  + L+N+
Sbjct: 508 FGLFFQPIFSVCWFLEVIALENV 530


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 216 QPTRDLSRFVRWPSISA 266
           +PTR L  F RW SI A
Sbjct: 465 EPTRHLDIFKRWKSILA 481


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +2

Query: 293 RXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPE 394
           R L++     + T+T+++  A  +   L ++RPE
Sbjct: 229 RKLRLKVCSRELTETVERVAAEAINSKLHEHRPE 262


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 253 PVYPHPASEGCTXAXSESAPXDQPIYP 333
           P + HP   G   A S+     QP++P
Sbjct: 163 PHHHHPGLTGLMQAPSQQQQHLQPVHP 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,482
Number of Sequences: 2352
Number of extensions: 6728
Number of successful extensions: 44
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)