BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0797.Seq (436 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 85 3e-17 AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 85 3e-17 AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 85 3e-17 AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 85 3e-17 X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 84 9e-17 >AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p protein. Length = 271 Score = 85.4 bits (202), Expect = 3e-17 Identities = 42/69 (60%), Positives = 51/69 (73%) Frame = +2 Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409 L + + +YIR+QRQKAVL + LKVPP I+QF+QTLDKT A LFK+LEKYRPE+ Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115 Query: 410 KERLXKAAE 436 K RL K AE Sbjct: 116 KLRLKKIAE 124 Score = 60.5 bits (140), Expect = 1e-09 Identities = 25/30 (83%), Positives = 26/30 (86%) Frame = +3 Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254 N LFEKRPKNF IGQ +QP RDLSRFVRWP Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWP 63 >AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD, isoform D protein. Length = 271 Score = 85.4 bits (202), Expect = 3e-17 Identities = 42/69 (60%), Positives = 51/69 (73%) Frame = +2 Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409 L + + +YIR+QRQKAVL + LKVPP I+QF+QTLDKT A LFK+LEKYRPE+ Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115 Query: 410 KERLXKAAE 436 K RL K AE Sbjct: 116 KLRLKKIAE 124 Score = 60.5 bits (140), Expect = 1e-09 Identities = 25/30 (83%), Positives = 26/30 (86%) Frame = +3 Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254 N LFEKRPKNF IGQ +QP RDLSRFVRWP Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWP 63 >AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC, isoform C protein. Length = 271 Score = 85.4 bits (202), Expect = 3e-17 Identities = 42/69 (60%), Positives = 51/69 (73%) Frame = +2 Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409 L + + +YIR+QRQKAVL + LKVPP I+QF+QTLDKT A LFK+LEKYRPE+ Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115 Query: 410 KERLXKAAE 436 K RL K AE Sbjct: 116 KLRLKKIAE 124 Score = 60.5 bits (140), Expect = 1e-09 Identities = 25/30 (83%), Positives = 26/30 (86%) Frame = +3 Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254 N LFEKRPKNF IGQ +QP RDLSRFVRWP Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWP 63 >AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA, isoform A protein. Length = 271 Score = 85.4 bits (202), Expect = 3e-17 Identities = 42/69 (60%), Positives = 51/69 (73%) Frame = +2 Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409 L + + +YIR+QRQKAVL + LKVPP I+QF+QTLDKT A LFK+LEKYRPE+ Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115 Query: 410 KERLXKAAE 436 K RL K AE Sbjct: 116 KLRLKKIAE 124 Score = 60.5 bits (140), Expect = 1e-09 Identities = 25/30 (83%), Positives = 26/30 (86%) Frame = +3 Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254 N LFEKRPKNF IGQ +QP RDLSRFVRWP Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWP 63 >X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein L7a protein. Length = 271 Score = 83.8 bits (198), Expect = 9e-17 Identities = 41/69 (59%), Positives = 50/69 (72%) Frame = +2 Query: 230 LVQICKMAQYIRIQRQKAVLXRXLKVPPXINQFTQTLDKTXAXGLFKILEKYRPETEAXX 409 L + + +YIR+QRQKAVL + LKVPP I+QF+QTLDKT A LFK+LEKYRPE+ Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAK 115 Query: 410 KERLXKAAE 436 RL K AE Sbjct: 116 NVRLKKIAE 124 Score = 60.5 bits (140), Expect = 1e-09 Identities = 25/30 (83%), Positives = 26/30 (86%) Frame = +3 Query: 165 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWP 254 N LFEKRPKNF IGQ +QP RDLSRFVRWP Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWP 63 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,418,542 Number of Sequences: 53049 Number of extensions: 252177 Number of successful extensions: 469 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 469 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1376136036 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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