SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0794.Seq
         (435 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    63   2e-09
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    50   2e-05
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    42   0.007
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    39   0.040
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.37 
UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1; ...    33   2.6  
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j...    33   3.5  
UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1; ...    33   3.5  
UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal hy...    33   3.5  
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p...    32   4.6  
UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3; ...    32   4.6  

>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 63.3 bits (147), Expect = 2e-09
 Identities = 30/53 (56%), Positives = 35/53 (66%)
 Frame = +2

Query: 50  PY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPI 208
           P  G+TANGS+ Q WFLRS+  TWITV ILELIHA+         AFIR + I
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 50.4 bits (115), Expect = 2e-05
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -1

Query: 432 GLLPSLDVVAVSQAPSPESNPDSP 361
           GLLPSLDVVAVSQAPSPE NPDSP
Sbjct: 166 GLLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 41.5 bits (93), Expect = 0.007
 Identities = 19/31 (61%), Positives = 20/31 (64%)
 Frame = +1

Query: 115 YLDNCGNSRANTCNQNSDQ*WDECFY*IKTN 207
           YLDNCGNSRANTC +      D C Y  KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497



 Score = 31.5 bits (68), Expect = 8.0
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 6   ICLSQRLSHACLS 44
           ICLSQRLSHACLS
Sbjct: 430 ICLSQRLSHACLS 442


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 39.1 bits (87), Expect = 0.040
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -1

Query: 408 VAVSQAPSPESNPDSPLPVTTMVVAETTIES 316
           +A+SQAPSPESN +SPLPV  M+     I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 35.9 bits (79), Expect = 0.37
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 301 MSALSTFDGSFCDYHG 348
           MSALSTFDG+FC YHG
Sbjct: 1   MSALSTFDGTFCAYHG 16


>UniRef50_Q0FI72 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius sp. HTCC2601|Rep: Putative uncharacterized
           protein - Roseovarius sp. HTCC2601
          Length = 507

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 107 YSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDGGPRV 226
           YS T + VV+ EL+    T+ SD  +A I + P+DG  R+
Sbjct: 139 YSATSMAVVLSELVVDDETIPSDNAAAQISAGPVDGETRI 178


>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC07011 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 101

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 118 LDNCGNSRANTCNQNSDQ*WDECFY*IKTNRRRASRPKSLILMNLETFADRMVKYR 285
           +DNC NSRANTC ++  +     F   +TNR +       +  +++   D ++  R
Sbjct: 1   MDNCSNSRANTCLESLTRKGTGAFIRTETNRVQRLMTSVPVTSSVDELCDNVILSR 56


>UniRef50_A2D9Z7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 872

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 426 LPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES**GRHLKD 292
           +PSL  V++SQ   P+  P +PLP    +++E   E   G  + D
Sbjct: 67  IPSLPPVSISQTIKPQIIPQNPLPTMNHIISEPLDEPASGEEMAD 111


>UniRef50_O60079 Cluster: Probable ubiquitin carboxyl-terminal
           hydrolase 12; n=1; Schizosaccharomyces pombe|Rep:
           Probable ubiquitin carboxyl-terminal hydrolase 12 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 979

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +3

Query: 222 ASEVVNFDESGNFCRSHGQVPATHLSNVCLINFRW*F---LRLPWLSRVTGNQGSIPERE 392
           + E+++F E        G   +  L   C+IN  W     LRL +L +   NQ S  E++
Sbjct: 243 SKEIIDFLEKSKTLVELGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQSSNEEQK 302

Query: 393 PEKRLP 410
            EKR+P
Sbjct: 303 QEKRVP 308


>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
           protein sorting protein 36 (ELL-associated protein of 45
           kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Vacuolar protein sorting protein
           36 (ELL-associated protein of 45 kDa), partial -
           Strongylocentrotus purpuratus
          Length = 349

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 364 PVTRDNHGSRRNYHRKLIRQTFERCVA 284
           PVTR+ HGS   YH +L +Q  E  +A
Sbjct: 190 PVTRETHGSGLKYHEELAKQLSEALIA 216


>UniRef50_A4RKZ9 Cluster: Putative uncharacterized protein; n=3;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 775

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 168 PVMG*VLLLDQNQSTEGLASEVVNFDESGNFCRSHGQVP 284
           P+M  +L L Q+  T G AS V+ FD   ++CR H  +P
Sbjct: 85  PIMLGMLWLKQHDPTIGFASHVITFD--SDYCRRHCNMP 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,008,271
Number of Sequences: 1657284
Number of extensions: 8201172
Number of successful extensions: 21501
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21493
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -