Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0789.Seq
         (439 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.67 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   0.89 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   1.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   8.3  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           22   8.3  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           22   8.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 0.67
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 154 EVEQRVHNRQGHEGVHLAAARQGHPPHHR 68
           E +QR  + Q H G   AAA    PP HR
Sbjct: 896 EQQQRSSSSQQHRGPGAAAATGPPPPTHR 924


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 0.89
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 178  LHGTHLRHEVEQRVHNRQGHEGVHLAAA 95
            L+ +HL H +    H+  G EGV +  A
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA 1336


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +3

Query: 48  CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP 173
           C  P P++       +    C P C C+      T +  CVP
Sbjct: 34  CCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFGNCVP 75


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 85   HPPHHRRGAGQAHRSQGRRAVG 20
            HP HH  G+G++ +  G   VG
Sbjct: 1402 HPHHHHNGSGRS-KPPGPEGVG 1422


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 230 SCPARDIPAPSTLCTS 183
           SC +  IP PS  C+S
Sbjct: 452 SCSSNSIPPPSNHCSS 467


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 146 FNLVAKVCPVEXLMCTMSKEPGCLSRDTMVPTRPKLR 256
           FN+   VC         S+ PG  +  T+ PT   LR
Sbjct: 73  FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLR 109


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 146 FNLVAKVCPVEXLMCTMSKEPGCLSRDTMVPTRPKLR 256
           FN+   VC         S+ PG  +  T+ PT   LR
Sbjct: 73  FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLR 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,290
Number of Sequences: 2352
Number of extensions: 9558
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)