BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0789.Seq (439 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.48 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.48 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.1 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.1 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 1.9 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 3.4 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 3.4 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.5 AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 5.9 AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 5.9 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 5.9 DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 7.9 DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 7.9 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.9 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 24.6 bits (51), Expect = 0.48 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 Query: 218 RDIPAPSTLCTSXTPRDTPSP 156 RD+P ST T+ RDT +P Sbjct: 137 RDLPGKSTTTTAEVKRDTINP 157 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 24.6 bits (51), Expect = 0.48 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%) Frame = -1 Query: 187 HQXLHGT-HLRHEVEQRVHNRQGHEGVHL---AAARQGHPPHH 71 H +H T H H H++ H AA + GH PHH Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.4 bits (48), Expect = 1.1 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 218 RDIPAPSTLCTSXTPRDTPSP 156 RD+P ST T RDT +P Sbjct: 137 RDLPGKSTTTTVEVKRDTINP 157 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 23.4 bits (48), Expect = 1.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 163 LRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 29 ++ E QR H+ Q H + A Q H +++ Q R Q R+ Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177 Score = 20.6 bits (41), Expect = 7.9 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = -1 Query: 160 RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 53 + + +Q+ H + EGV A + RGA Q Sbjct: 1226 QQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQ 1261 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 22.6 bits (46), Expect = 1.9 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Frame = +1 Query: 184 DVHNVEGAGMSLAGHDGAHTPQVT---PSVIIHKFPDSNLM---KSIIFVVAXV*LDGIV 345 DVH V GAG + HD +T VI S ++ ++ +++ L GIV Sbjct: 110 DVHGVIGAGHWIGDHDVDKDELITGWSAVVITAAICTSGIVGRTHTVGYIIIGFLLAGIV 169 Query: 346 D--FDKWVWVADG 378 W+W G Sbjct: 170 QPFLIHWIWTPHG 182 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 21.8 bits (44), Expect = 3.4 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = -2 Query: 207 GSFDIVHIKXSTGHTFATRLNNVFIIGKGTKAYISLPR 94 G F VH+ T F T + + + + YI L R Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 21.8 bits (44), Expect = 3.4 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = -2 Query: 207 GSFDIVHIKXSTGHTFATRLNNVFIIGKGTKAYISLPR 94 G F VH+ T F T + + + + YI L R Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.4 bits (43), Expect = 4.5 Identities = 10/44 (22%), Positives = 15/44 (34%) Frame = -1 Query: 187 HQXLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 56 H G + H H+R G + + R P G+G Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798 >AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform C protein. Length = 548 Score = 21.0 bits (42), Expect = 5.9 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +1 Query: 211 MSLAGHDGAHTPQVTPSVIIHK 276 + LAGH G TP I+ K Sbjct: 243 VQLAGHQGNFRAGPTPGTILKK 264 >AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform B protein. Length = 463 Score = 21.0 bits (42), Expect = 5.9 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +1 Query: 211 MSLAGHDGAHTPQVTPSVIIHK 276 + LAGH G TP I+ K Sbjct: 158 VQLAGHQGNFRAGPTPGTILKK 179 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 21.0 bits (42), Expect = 5.9 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = +1 Query: 211 MSLAGHDGAHTPQVTPSVIIHK 276 + LAGH G TP I+ K Sbjct: 477 VQLAGHQGNFRAGPTPGTILKK 498 >DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant 2 precursor protein. Length = 94 Score = 20.6 bits (41), Expect = 7.9 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = +3 Query: 108 CTPSCPCRL 134 C P C CRL Sbjct: 67 CAPGCVCRL 75 >DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant 1 precursor protein. Length = 92 Score = 20.6 bits (41), Expect = 7.9 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = +3 Query: 108 CTPSCPCRL 134 C P C CRL Sbjct: 67 CAPGCVCRL 75 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 20.6 bits (41), Expect = 7.9 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -3 Query: 209 PAPSTLCTSXTPRDTPSPRG 150 P+P+ C S T SP+G Sbjct: 745 PSPAEQCASTTTITARSPQG 764 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 123,184 Number of Sequences: 438 Number of extensions: 2716 Number of successful extensions: 20 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 11327868 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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