Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0787.Seq
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.073
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.073
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 348 RXNFSIRYWSWNYRGCWHQTC 286
           R NF   +  WNY  CW   C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766



 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/25 (28%), Positives = 9/25 (36%)
 Frame = -1

Query: 360  ELFNRXNFSIRYWSWNYRGCWHQTC 286
            +   + NF      W Y  CW   C
Sbjct: 1505 QFLEKWNFDGLDLDWEYPKCWQVDC 1529



 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 357  LFNRXNFSIRYW 322
            +F   NFSI YW
Sbjct: 1615 VFYNANFSINYW 1626



 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/19 (36%), Positives = 7/19 (36%)
 Frame = -1

Query: 342  NFSIRYWSWNYRGCWHQTC 286
            NF      W Y  CW   C
Sbjct: 1936 NFDGLDLDWEYPKCWQVDC 1954



 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/19 (36%), Positives = 7/19 (36%)
 Frame = -1

Query: 342  NFSIRYWSWNYRGCWHQTC 286
            NF      W Y  CW   C
Sbjct: 2434 NFDGLDLDWEYPKCWQVDC 2452


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   HGQCTGDASFKCLPY 46
           HG    DAS+KC+ Y
Sbjct: 67  HGVWKPDASYKCMQY 81


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   HGQCTGDASFKCLPY 46
           HG    DAS+KC+ Y
Sbjct: 67  HGVWKPDASYKCMQY 81


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   HGQCTGDASFKCLPY 46
           HG    DAS+KC+ Y
Sbjct: 67  HGVWKPDASYKCMQY 81


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   HGQCTGDASFKCLPY 46
           HG    DAS+KC+ Y
Sbjct: 67  HGVWKPDASYKCMQY 81


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   HGQCTGDASFKCLPY 46
           HG    DAS+KC+ Y
Sbjct: 67  HGVWKPDASYKCMQY 81


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -1

Query: 339 FSIRYWSWNYRGCWHQ 292
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,913
Number of Sequences: 336
Number of extensions: 2430
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)