BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0787.Seq
(507 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 23 5.9
AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450 pr... 23 7.9
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.0 bits (47), Expect = 5.9
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 192 PRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 49
P A S A +P LDV+ AP P + D P VT E+ +ES
Sbjct: 283 PAATSAPLAFKVP-LDVLP---APFPGPSTDEPRTVTRKRTTESDVES 326
>AY028786-1|AAK32960.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 22.6 bits (46), Expect = 7.9
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 475 LILNRRFLE--RRLTDDMLRKRVSITADAVHRQRGAQM 368
L LN+ + R+ D++++ SIT +AVH + +M
Sbjct: 322 LALNQELQDKARQNITDVMKQHSSITYEAVHEMKYIEM 359
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,933
Number of Sequences: 2352
Number of extensions: 11080
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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