Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0785.Seq
(417 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 112 2e-24
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 91 6e-18
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 91 8e-18
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 90 2e-17
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 85 6e-16
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 83 2e-15
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 82 4e-15
UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-12
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 72 6e-12
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 64 1e-09
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 62 4e-09
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 59 3e-08
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 59 3e-08
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 59 3e-08
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 56 3e-07
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 53 2e-06
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 50 2e-05
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 49 3e-05
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 49 4e-05
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 42 0.004
UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 40 0.027
UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|R... 37 0.19
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.34
UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1; ... 36 0.44
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 35 0.78
UniRef50_Q7Z601 Cluster: Probable G-protein coupled receptor 142... 33 2.4
UniRef50_A0EB18 Cluster: Chromosome undetermined scaffold_87, wh... 33 3.1
UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_Q11AJ4 Cluster: Transcriptional regulator, GntR family;... 32 5.5
UniRef50_UPI00015B4ABA Cluster: PREDICTED: similar to zinc finge... 31 7.2
UniRef50_Q06I94 Cluster: Fasciclin-like protein FLA12; n=8; BEP ... 31 7.2
UniRef50_Q1JTE7 Cluster: Putative uncharacterized protein precur... 31 7.2
UniRef50_Q85X22 Cluster: ORF50f; n=1; Pinus koraiensis|Rep: ORF5... 31 9.6
UniRef50_A0C7B3 Cluster: Chromosome undetermined scaffold_155, w... 31 9.6
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 112 bits (270), Expect = 2e-24
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 465 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 524
Query: 73 K 71
+
Sbjct: 525 E 525
Score = 97.9 bits (233), Expect = 7e-20
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 410 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 91.5 bits (217), Expect = 6e-18
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P+I+G E YN ARGVQK+LQ+YK+ QDIIAILGMDELSE+ KLTVARARKIQRF
Sbjct: 440 PHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRF 493
Score = 77.4 bits (182), Expect = 1e-13
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAE+FTG GK V L+E I F +L G YD L E +FYMVG I+EVVAKA+ +A
Sbjct: 495 SQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIA 554
Query: 73 KNA 65
K +
Sbjct: 555 KES 557
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 91.1 bits (216), Expect = 8e-18
Identities = 44/63 (69%), Positives = 48/63 (76%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAEVFTG GKLV LE+TIKGF ++ G+YDHLPE AFYMVG IEE V KA LA
Sbjct: 441 SQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDHLPEAAFYMVGSIEEAVEKAKKLA 500
Query: 73 KNA 65
A
Sbjct: 501 AEA 503
Score = 77.8 bits (183), Expect = 8e-14
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P I+G E Y V+R VQ LQ YK+ QDIIAILGMDELSEE K+ VARARKI+RF
Sbjct: 386 PMIVGEEHYEVSRKVQSTLQRYKALQDIIAILGMDELSEEDKIAVARARKIERF 439
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 89.8 bits (213), Expect = 2e-17
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAEVFTG GKLV LE+TI+ F ++AG+YDHLPE AFYMVG I+E +AKA+ +
Sbjct: 425 SQPFHVAEVFTGAPGKLVSLEDTIRSFKAVVAGEYDHLPEGAFYMVGDIDEAIAKAEKMK 484
Query: 73 KNA 65
+ A
Sbjct: 485 QEA 487
Score = 75.4 bits (177), Expect = 4e-13
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P I+G E Y VAR VQ+ LQ YK QDIIAILGMDELSE+ K V RAR+IQRF
Sbjct: 370 PKIVGEEHYQVARQVQQTLQTYKGLQDIIAILGMDELSEDDKKIVGRARRIQRF 423
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 85.0 bits (201), Expect = 6e-16
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
PNI+G E Y VARGVQ++LQ YK QDIIAILGM+ELSEE KL V RARKIQRF
Sbjct: 353 PNIVGKEHYEVARGVQEVLQRYKDLQDIIAILGMEELSEEDKLIVQRARKIQRF 406
Score = 76.6 bits (180), Expect = 2e-13
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
+QP VAE F+G G VP++ETI+GF +IL G YD LPE AFYMVG I+E V KA L
Sbjct: 408 TQPTHVAERFSGIPGVYVPIKETIRGFKEILEGRYDDLPEAAFYMVGTIDEAVEKAKKLM 467
Query: 73 KNA 65
K+A
Sbjct: 468 KSA 470
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 83.4 bits (197), Expect = 2e-15
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAEVFTG GKLV L++T+ F +L G YD++PE AFYMVG IE+VVAKA+ LA
Sbjct: 448 SQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAKAEKLA 507
Query: 73 KNA 65
A
Sbjct: 508 AEA 510
Score = 77.4 bits (182), Expect = 1e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = -1
Query: 411 IIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
++G E Y+VA VQ+ LQ YKS QDIIAILGMDELSE+ KLTV RARKIQRF
Sbjct: 395 VVGQEHYDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQRF 446
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 82.2 bits (194), Expect = 4e-15
Identities = 38/63 (60%), Positives = 47/63 (74%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAEVFTG GK V +E+T++ F +I+ G YD LPE AFYMVG I+E VAKA+ +A
Sbjct: 421 SQPFHVAEVFTGMPGKFVQVEDTVRSFREIIDGKYDDLPENAFYMVGSIDEAVAKAEKMA 480
Query: 73 KNA 65
A
Sbjct: 481 AEA 483
Score = 74.9 bits (176), Expect = 6e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P I+G E Y AR VQ+ILQ YK+ QDIIAILGMDELSE+ + V RAR+IQRF
Sbjct: 366 PRIVGDEHYQTARDVQEILQRYKNLQDIIAILGMDELSEDDRKVVGRARRIQRF 419
>UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 316
Score = 72.9 bits (171), Expect = 2e-12
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P+I+G E YN A GVQK+LQ+YK+ QD IA L MDELSE KL VARA KI RF
Sbjct: 137 PHILGEEHYNTAYGVQKVLQNYKNLQDCIATLRMDELSENDKLIVARACKIHRF 190
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 71.7 bits (168), Expect = 6e-12
Identities = 36/65 (55%), Positives = 43/65 (66%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
SQPF VAE FTG G +V +E+TIKGF IL G+ D+LPE AF VG IEE + K L
Sbjct: 441 SQPFTVAEQFTGVPGAMVAIEDTIKGFKMILDGEVDYLPEPAFLNVGTIEEAIEKGKKLL 500
Query: 73 KNA*K 59
+ A K
Sbjct: 501 EQANK 505
Score = 66.1 bits (154), Expect = 3e-10
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P+I+G E Y+VA+ V++ILQ K QDII+ILGM+ELS+ +L V RAR++QRF
Sbjct: 386 PHIVGQEHYDVAQRVKQILQRNKELQDIISILGMEELSDADRLVVNRARRVQRF 439
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -1
Query: 414 NIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
+I+G E YN+A+ V++ LQ Y QDIIAILG+DELS++ + V +AR+IQRF
Sbjct: 384 DILGEEHYNIAQRVKETLQRYNELQDIIAILGLDELSDDDRKVVNKARRIQRF 436
Score = 56.0 bits (129), Expect = 3e-07
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGD-YDHLPEVAFYMVGPIEEVVAKADTL 77
SQPF VAE FTG G LV +++TIKGF +L D PE AF + G IEE + + +
Sbjct: 438 SQPFHVAEQFTGLTGALVDIKDTIKGFKMLLDDDSLLKYPEPAFNLKGTIEEAIEAGEQM 497
Query: 76 AKNA 65
K A
Sbjct: 498 LKEA 501
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 62.1 bits (144), Expect = 4e-09
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = -1
Query: 414 NIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
+ +G YNVA+ + + L YK QD+IAILG+DELSE +L+V R RKI+RF
Sbjct: 444 SFVGERHYNVAQSIIQCLNRYKELQDLIAILGLDELSESDRLSVLRGRKIERF 496
Score = 51.6 bits (118), Expect = 6e-06
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 101
SQPF VAEVF+ GK V +EE + GF IL G YD E FY+ G + +
Sbjct: 498 SQPFFVAEVFSRTPGKYVKVEEALDGFDGILTGRYDDRAEADFYLQGAMSD 548
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 59.3 bits (137), Expect = 3e-08
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 89
+QPF V+E FTG G V L + ++G +IL G+++H+PE F VG IEE + K
Sbjct: 617 TQPFVVSEKFTGQKGVFVTLNDALRGMERILTGEFNHIPETYFAYVGTIEEALEK 671
Score = 40.7 bits (91), Expect = 0.012
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = -1
Query: 390 NVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
N+A+ IL+ KS +DII ILG D LSE + TV AR I++F
Sbjct: 571 NIAKETIAILEKSKSLEDIINILGFDALSEADRKTVRIARIIRKF 615
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 59.3 bits (137), Expect = 3e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
+QPF VAE F+G GK V L++++KG IL GD +H+P F VG +EE++ K + A
Sbjct: 705 TQPFVVAEKFSGVPGKFVRLKDSLKGIKTILDGDLNHIPVSYFSFVGVVEEIIEKFNLDA 764
Query: 73 K 71
K
Sbjct: 765 K 765
Score = 35.9 bits (79), Expect = 0.34
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -1
Query: 399 EXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
E ++A+ + L+ K+ +DII ILG D LSE+ K V R+++ F
Sbjct: 656 EHLDIAKKTVQTLEKTKTLEDIINILGFDALSEDDKKVVEVGRRLKWF 703
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 59.3 bits (137), Expect = 3e-08
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P + E + VA+ V++I+Q YK QD+IAILG++ELS++ ++ V RARK++RF
Sbjct: 103 PYYVEQEHFCVAQDVKQIMQRYKELQDVIAILGLEELSDQDRIIVDRARKVERF 156
Score = 56.0 bits (129), Expect = 3e-07
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEV 98
SQPF VAE+FT G+ V L TI GFSKI+ GD D E +FY+ G I+++
Sbjct: 158 SQPFFVAEIFTRIQGRYVSLGNTIFGFSKIIKGDLDTFMEGSFYLKGAIDDI 209
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/54 (42%), Positives = 40/54 (74%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P ++GAE +A ++I++ Y+S QD+I++LG++EL+ E + V RAR++QRF
Sbjct: 353 PLVVGAEHVAIATEARRIIEHYRSLQDVISLLGIEELAVEDRRIVGRARRLQRF 406
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKAD 83
+QPF V E FTG G+ V L +T+ G ILAG+ D E + YMVG +EE A+ +
Sbjct: 408 TQPFAVTEAFTGMPGRSVALADTLAGCRAILAGECDDWQERSLYMVGTLEEARAREE 464
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 53.2 bits (122), Expect = 2e-06
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P ++G VA V+++++ Y+ QD+IA+LG+DEL + + V RAR++QRF
Sbjct: 383 PLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRF 436
Score = 51.2 bits (117), Expect = 8e-06
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 89
+QPF V E FTG AG V + +TI G IL GD D E + YMVG +++ K
Sbjct: 438 TQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRK 492
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 50.0 bits (114), Expect = 2e-05
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1
Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
P IIG E Y+ R Q +LQ YK GMDELSE+ K RARKIQR+
Sbjct: 115 PLIIGQEHYDTTRAQQGVLQKYKEYYIYSRKSGMDELSEDDKRASNRARKIQRY 168
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 49.2 bits (112), Expect = 3e-05
Identities = 19/52 (36%), Positives = 39/52 (75%)
Frame = -1
Query: 411 IIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
++G Y++A+ V++ L+ Y+ +D+I+++G++ELS + + V RARK+QR+
Sbjct: 369 LLGERHYSIAQAVREHLERYQELEDMISMMGIEELSPKDRAIVLRARKLQRY 420
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 101
SQPF V ++ TG GK V LE T+ L GDYD E A YM G +++
Sbjct: 422 SQPFHVTKLQTGMEGKSVSLEHTLTDCESFLRGDYDEFSEEACYMRGAMDK 472
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 48.8 bits (111), Expect = 4e-05
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = -1
Query: 411 IIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
IIG + + ILQ Y+ +DII+ILG DEL E++K+ V +A ++Q F
Sbjct: 356 IIGTRHFQAILETKNILQKYQELEDIISILGFDELEEDSKIIVKKAFQLQNF 407
Score = 34.7 bits (76), Expect = 0.78
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDY-DHLPEVAFYMVG 113
+Q F AE FT G VPL ETI+ +IL G Y PE+ F VG
Sbjct: 409 TQRFFTAENFTKEKGVYVPLNETIESVIRILEGKYLKQSPEI-FSFVG 455
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +1
Query: 253 REPLNFTCTCHCQLGFFRQLVHTQNSNNVLXGFVVLKNFLNSTCNIVXLSSNNI 414
+E L+ T TC QL F RQ VH QN ++V V L+ LN+T + V L ++++
Sbjct: 267 QETLDLTRTCDRQLVFRRQFVHAQNRDDVAQFLVALQRLLNATGDRVVLFTDHV 320
Score = 33.1 bits (72), Expect = 2.4
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 104 LNRSNHVECYFWQMIIVPC*NFGESFDSFLKWY*FTRMSSEHLSYLERL 250
++R++HVE F Q++ + + E+ D FL+ + R + EH S +ERL
Sbjct: 217 VDRADHVERLFRQVVALAVDDHLEATDRFLQRHVLARRAREHFSDVERL 265
>UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1;
Comamonas testosteroni KF-1|Rep: Putative
uncharacterized protein - Comamonas testosteroni KF-1
Length = 534
Score = 41.9 bits (94), Expect = 0.005
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 253 REPLNFTCTCHCQLGFFRQLVHTQNSNNVLXGFVVLKNFLNSTCNIVXLSSNNIG 417
+E L+ T H QL F QLVHTQN ++V V L+ L+ ++V L +N++G
Sbjct: 101 QETLHLTSAGHDQLVFGSQLVHTQNRDDVAQFLVALQRTLHLASHLVVLFANHLG 155
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 39.5 bits (88), Expect = 0.027
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -1
Query: 411 IIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQR-FPHNL 244
I+G + + V+KIL YK +++I ILG+ EL +L V +A++++ F NL
Sbjct: 348 IVGKRHILLVKRVKKILHKYKQLEEMIMILGVQELEPNNRLIVKKAQQLKNYFSQNL 404
>UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|Rep:
ATP synthase subunit B - Bacillus sp. NRRL B-14911
Length = 371
Score = 36.7 bits (81), Expect = 0.19
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYD 146
+QPF AE FTG G+ V L+E + KIL G D
Sbjct: 315 TQPFYTAEAFTGQKGQSVSLQENLSDVRKILDGGAD 350
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 35.9 bits (79), Expect = 0.34
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 256 EPLNFTCTCHCQLGFFRQLVHTQNSNNVLXGFVVLKNFLNSTCNIVXLSSNNIG 417
E L+ H QL FRQLVH ++ ++VL V L+ L+ T + V L + + G
Sbjct: 157 EALDLAGAGHRQLVLFRQLVHPEDGDDVLKRLVALQRLLDLTGDFVMLFAEDGG 210
>UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1;
Alcanivorax borkumensis SK2|Rep: Acyl-CoA dehydrogenase,
putative - Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573)
Length = 764
Score = 35.5 bits (78), Expect = 0.44
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 175 FSKILAGDYDHLPE-VAFYMVGPIEEVVAKADTLA 74
F KILA +YD LPE Y+ GP+EE++ AD+ A
Sbjct: 44 FEKILAENYDTLPEHEQAYIDGPVEELLRMADSYA 78
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 34.7 bits (76), Expect = 0.78
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 253 REPLNFTCTCHCQLGFFRQLVHTQNSNNVLXGFVVLKNFLNSTCNIVXLSSNNI 414
+E L+ H QL FRQ VH ++ ++VL V LK+ L+ T ++V ++++
Sbjct: 72 QEALDLPGAGHGQLVLFRQFVHPEDRDDVLQRLVALKDTLHVTGHLVVFLADDL 125
>UniRef50_Q7Z601 Cluster: Probable G-protein coupled receptor 142;
n=18; Amniota|Rep: Probable G-protein coupled receptor
142 - Homo sapiens (Human)
Length = 462
Score = 33.1 bits (72), Expect = 2.4
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = -1
Query: 372 QKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRFPHNLSK*LRCSLDMRVN*YHL 193
QKI S QDI A+LG + +EE K V+ A+K Q + S+ LR S + + L
Sbjct: 10 QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68
Query: 192 R-KLSKDSPKF*Q 157
R + SKDS F Q
Sbjct: 69 RIRPSKDSSSFRQ 81
>UniRef50_A0EB18 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 32.7 bits (71), Expect = 3.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 368 KFFRTTNPCRTLLLFWVWTSCLK 300
K + TN + LLFWVW +CLK
Sbjct: 10 KHYTVTNHSKISLLFWVWMNCLK 32
>UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 678
Score = 32.3 bits (70), Expect = 4.1
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 232 QLLGKV--VREPL-NFTCTCHCQLGFFRQLVHTQNSNNVLXGFVVLKNFLNSTCNIVXLS 402
+LLG V +RE L N T T + QLVHTQN ++VL V+L+ L+ + V L
Sbjct: 185 ELLGDVEGLREELLNLTGTVDRKALLLGQLVHTQNCDDVLKVGVLLQELLDLDGDTVVLL 244
Query: 403 SNNIG 417
+++ G
Sbjct: 245 ADDRG 249
>UniRef50_Q11AJ4 Cluster: Transcriptional regulator, GntR family;
n=1; Mesorhizobium sp. BNC1|Rep: Transcriptional
regulator, GntR family - Mesorhizobium sp. (strain BNC1)
Length = 227
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -3
Query: 286 SGTCT*NSEVPSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDH---LPEVAFYMV 116
+ C ++E Q + V EV HA KL+PL K+ DH + EV F+MV
Sbjct: 77 ASVCAYSAETVRQLYDVREVLELHAAKLIPLPLPSDMLDKLKRVQQDHDRAVDEVDFHMV 136
>UniRef50_UPI00015B4ABA Cluster: PREDICTED: similar to zinc finger
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to zinc finger protein - Nasonia vitripennis
Length = 1307
Score = 31.5 bits (68), Expect = 7.2
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 96 TTSSIGPTM*NATSGK*S*SPARI-LENPLIVSSSGTSLPACPVNTSATWKGCEGTSEFY 272
TT+++G +TS S SP R E+P++V P P +T T++ + F
Sbjct: 296 TTTTLGGKRNRSTSSGHS-SPTRTGNESPVVVRQKHHHSPLTPPSTERTFQCKQCGKAFK 354
Query: 273 VHVPLSTWLL--QTTRPYP 323
LST LL TRPYP
Sbjct: 355 RSSTLSTHLLIHSDTRPYP 373
>UniRef50_Q06I94 Cluster: Fasciclin-like protein FLA12; n=8; BEP
clade|Rep: Fasciclin-like protein FLA12 - Triticum
aestivum (Wheat)
Length = 276
Score = 31.5 bits (68), Expect = 7.2
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 174 NPLIVSSSGTSLPACPVNTSATWKGCEGTSEFYVHVPLSTWLLQTTRP 317
NP+ +SGT P C VN +AT S VH + T L+ TRP
Sbjct: 140 NPVRTQASGTDGP-CTVNVTATSNSAVNVSTGIVHTTVGT-ALRATRP 185
>UniRef50_Q1JTE7 Cluster: Putative uncharacterized protein
precursor; n=1; Toxoplasma gondii RH|Rep: Putative
uncharacterized protein precursor - Toxoplasma gondii RH
Length = 651
Score = 31.5 bits (68), Expect = 7.2
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 84 SALATTSSIGPTM*NATSGK*S*SPARILENPLIVSSSGTSLPACPVNTSATWKGCEGTS 263
S+ +++SS P+ ++S S SP+ + S S +S P+ P +TS W+G +G
Sbjct: 316 SSSSSSSSPSPSSSPSSSPSSSSSPSSPSSSSSPSSPSSSSSPSSPSSTSLPWRGEDGEG 375
Query: 264 E 266
E
Sbjct: 376 E 376
>UniRef50_Q85X22 Cluster: ORF50f; n=1; Pinus koraiensis|Rep: ORF50f
- Pinus koraiensis (Korean pine)
Length = 50
Score = 31.1 bits (67), Expect = 9.6
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2
Query: 266 ILRARATVNLASSDNSSIPKIAIMS 340
I A AT+ +SSDNSS P IAIMS
Sbjct: 26 IFLALATIKRSSSDNSSSPGIAIMS 50
>UniRef50_A0C7B3 Cluster: Chromosome undetermined scaffold_155, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_155, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 5133
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 62 LSILSKSISFGHNLLNRSNHVECYFW-QMIIVPC*NFGESFDSFLKWY 202
LS+L K + FG+ LL EC QM+I +GE + ++ WY
Sbjct: 2279 LSLLKK-LQFGNKLLQLMKKAECPIKVQMLIQEIPQYGEIINKYIHWY 2325
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,691,154
Number of Sequences: 1657284
Number of extensions: 7279829
Number of successful extensions: 16723
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 16309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16718
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -