Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0785.Seq
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.30 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.39 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   0.52 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   0.52 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   8.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.4  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 166 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 80
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 291 IKSGDYNHVPMIFGYTTREGMIVEMMRKTET 321


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -3

Query: 187 TIKGFSKILAGDYDHLPEVAFYMV--GPIEEVVAKADT 80
           T +  + I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 286 TDEPIATIKSGDYNHVPMIFGYTTREGMIVEMMRKNET 323


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 166 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 80
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 291 IKSGDYNHVPMIFGYTTREGMIVEMMRKNET 321


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 166 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 80
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 293 IKSGDYNHVPMIFGYTTREGMIVEMMRKNET 323


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 353 TNPCRTLLLFWVWTSCLKKP 294
           TNP + + +F  W   L+KP
Sbjct: 435 TNPKQYMEIFARWKDILEKP 454


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +1

Query: 238 LGKVVREPLNFTCTCHCQLGFFRQLVHTQNSNNVLXGF 351
           +G+     +NF  T  CQ G     +H  +      GF
Sbjct: 331 MGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGF 368


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 336 IIAILGMDELSEEAKLTVARARKIQRF 256
           I+ I+G D ++  ++ T     K+Q F
Sbjct: 226 ILIIMGCDVVASNSRKTAEMCYKLQGF 252


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 294 KLTVARARKIQRFPHNLSK*LRCSLDMRVN*YHLRKLSKDSPKF 163
           KLT A +  +Q FP +  K L    ++ ++   LR +  +S  F
Sbjct: 21  KLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHF 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,971
Number of Sequences: 336
Number of extensions: 2021
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)