Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0785.Seq
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    25   1.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   4.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   4.5  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    23   5.9  

>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 238 VAEVFTGHAGKLVPLEETIKGFSKILAGDYD 146
           +AE F   AG  VP   +  GF + +AG++D
Sbjct: 64  IAEKFVLTAGHCVPSAISPDGFPEAVAGEHD 94


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 217 VQ*TPQLLGKVVREPLNFTCTCHCQLGFFRQLVHTQ 324
           VQ TP ++ +     L     C   LG    L+HT+
Sbjct: 257 VQQTPHIIQQCESTKLQIVVVCPALLGLSPSLLHTK 292


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -3

Query: 211 GKLVPLEETI--KGFSKILAGDYDHL 140
           GK+V  +  +  KGFS++   DYD +
Sbjct: 487 GKIVQYKARLVAKGFSQVYGADYDEV 512


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +3

Query: 39  INSHEMTF*AFLARVSALATTSSIGPTM*NATSGK*S*SPARILENPLIVSSSGTSLPAC 218
           +  H+++  A  +  S  ATT++   T    T+   + +P    +  L + +S T + A 
Sbjct: 133 VAKHDLSMGATTSTTSTTATTTTTTTTTTTTTTTTTTPNPVGESDQILEIQASTTPVSAT 192

Query: 219 PVN---TSATWKGCEGT 260
             N   TS   +  EGT
Sbjct: 193 TANSLGTSLDAQSIEGT 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,131
Number of Sequences: 2352
Number of extensions: 8138
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)