Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0785.Seq
         (417 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312) p...   112   4e-25
X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for ...   112   4e-25
M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit...   112   4e-25
M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.                 112   4e-25
D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.       112   4e-25
BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+ transp...   112   4e-25
DQ403107-1|ABD77240.1|  445|Homo sapiens mitochondrial ATP synth...    98   1e-20
AY288421-1|AAP72130.1|  462|Homo sapiens G protein-coupled recep...    33   0.38 
AB196530-1|BAD97441.1|  462|Homo sapiens G protein-coupled recep...    33   0.38 

>X05606-1|CAA29095.1|  312|Homo sapiens beta-subunit (AA 1-312)
           protein.
          Length = 312

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 248 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 307

Query: 73  K 71
           +
Sbjct: 308 E 308



 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 193 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 246


>X03559-1|CAA27246.1|  539|Homo sapiens protein ( Human mRNA for
           F1-ATPase beta subunit (F-1 beta). ).
          Length = 539

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 475 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 534

Query: 73  K 71
           +
Sbjct: 535 E 535



 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 420 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 473


>M27132-1|AAA51809.1|  529|Homo sapiens ATP synthase beta subunit
           precursor protein.
          Length = 529

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 465 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 524

Query: 73  K 71
           +
Sbjct: 525 E 525



 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 410 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463


>M19483-1|AAA51808.1|  529|Homo sapiens ATPSB protein.
          Length = 529

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 465 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 524

Query: 73  K 71
           +
Sbjct: 525 E 525



 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 46/54 (85%), Positives = 50/54 (92%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS  DIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 410 PNIVGSEHYDVARGVQKILQDYKSLHDIIAILGMDELSEEDKLTVSRARKIQRF 463


>D00022-1|BAA00016.1|  539|Homo sapiens F1 beta subunit protein.
          Length = 539

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 475 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 534

Query: 73  K 71
           +
Sbjct: 535 E 535



 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 420 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 473


>BC016512-1|AAH16512.1|  529|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, beta polypeptide
           protein.
          Length = 529

 Score =  112 bits (270), Expect = 4e-25
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLA 74
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAKAD LA
Sbjct: 465 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLA 524

Query: 73  K 71
           +
Sbjct: 525 E 525



 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 410 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463


>DQ403107-1|ABD77240.1|  445|Homo sapiens mitochondrial ATP
           synthase, H+ transporting F1 complex beta subunit
           protein.
          Length = 445

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 47/54 (87%), Positives = 51/54 (94%)
 Frame = -1

Query: 417 PNIIGAEXYNVARGVQKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRF 256
           PNI+G+E Y+VARGVQKILQDYKS QDIIAILGMDELSEE KLTV+RARKIQRF
Sbjct: 346 PNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 399



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -3

Query: 253 SQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYM 119
           SQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYM
Sbjct: 401 SQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYM 445


>AY288421-1|AAP72130.1|  462|Homo sapiens G protein-coupled receptor
           142 protein.
          Length = 462

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = -1

Query: 372 QKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRFPHNLSK*LRCSLDMRVN*YHL 193
           QKI     S QDI A+LG +  +EE K  V+ A+K Q    + S+ LR S  +    + L
Sbjct: 10  QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68

Query: 192 R-KLSKDSPKF*Q 157
           R + SKDS  F Q
Sbjct: 69  RIRPSKDSSSFRQ 81


>AB196530-1|BAD97441.1|  462|Homo sapiens G protein-coupled receptor
           protein.
          Length = 462

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = -1

Query: 372 QKILQDYKSXQDIIAILGMDELSEEAKLTVARARKIQRFPHNLSK*LRCSLDMRVN*YHL 193
           QKI     S QDI A+LG +  +EE K  V+ A+K Q    + S+ LR S  +    + L
Sbjct: 10  QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68

Query: 192 R-KLSKDSPKF*Q 157
           R + SKDS  F Q
Sbjct: 69  RIRPSKDSSSFRQ 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,356,087
Number of Sequences: 237096
Number of extensions: 1175814
Number of successful extensions: 2747
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2747
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)