Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0783.Seq
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    39   0.053
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   1.1  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    34   1.5  
UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1; Ph...    33   2.0  
UniRef50_Q54II6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.5  
UniRef50_A2F6E1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_UPI0000DD87BA Cluster: PREDICTED: similar to mucin 19; ...    31   8.0  
UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2; ...    31   8.0  
UniRef50_A0C6B7 Cluster: Chromosome undetermined scaffold_152, w...    31   8.0  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 38.7 bits (86), Expect = 0.053
 Identities = 21/44 (47%), Positives = 23/44 (52%)
 Frame = +2

Query: 302 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVK 433
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVK 73


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +1

Query: 376 SWNYRGCWHQTCP 414
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 217 RILILNRRFLERRSPTICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 378
           R++   ++F            V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 142 RVMSFQKKFKSPEFAAQYDRPVNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_Q7N0G3 Cluster: Similarities with ribonuclease; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep:
           Similarities with ribonuclease - Photorhabdus
           luminescens subsp. laumondii
          Length = 272

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +1

Query: 256 SPTICSANVSVSPRMRCTDSAAH-KCNYELFNRNNFSIRYWSWNYRGCWHQTC 411
           SP  C        R++ ++  A  +  YE F    FS   +SW   G W QTC
Sbjct: 92  SPAFCKGKAKNIERLKKSNKLAEAQREYEKFELQCFSENKFSWVIHGLWAQTC 144


>UniRef50_Q54II6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 157

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
 Frame = -3

Query: 299 IRGDTDTFAEHIVGERRSKKRR---FNIKILSRCSSVSVEVGRQFYFEQ 162
           IRG+ + F+ +IV +  SK R    FN+ IL+  + +  E G++F F+Q
Sbjct: 88  IRGEKNMFSFYIVRDSVSKYREEPLFNLVILAFFTQMDFEAGKKFNFQQ 136


>UniRef50_A2F6E1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 482

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +1

Query: 196 LTEEHRDRILILNRRFLERRSPTICSA----NVSVSPRMRCTDSAAHKCNYELFNR 351
           L +EHRDR+    RR   RR+P    A    N SV+  +   D  A K   + F R
Sbjct: 292 LVQEHRDRLSSEERRVTARRTPIADDALERINSSVNSEIERLDEEAEKQKMDFFTR 347


>UniRef50_UPI0000DD87BA Cluster: PREDICTED: similar to mucin 19; n=5;
            Catarrhini|Rep: PREDICTED: similar to mucin 19 - Homo
            sapiens
          Length = 7328

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +1

Query: 214  DRILILNRRFLERRSPTICSANVSVSPRMRCTDSAA 321
            D + +LN  FL RR+PT+ +A+ + SP  + TD+A+
Sbjct: 2101 DSLTVLNPAFL-RRTPTVSAASTTSSPVSKHTDAAS 2135


>UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium avium|Rep: Putative uncharacterized
           protein - Mycobacterium avium (strain 104)
          Length = 380

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 322 HKCNYELFNRNNFSIRYWSWN 384
           H C YE+F++    +R+W+WN
Sbjct: 159 HNCYYEIFDQLGPQLRWWAWN 179


>UniRef50_A0C6B7 Cluster: Chromosome undetermined scaffold_152,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_152,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1525

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 232 NRRFLERRSPTICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNYRG-CWHQT 408
           NR + E+++   C+    +    +CTD +A +      N+N F   Y  + Y   CW   
Sbjct: 459 NRMYNEKQNSCFCAYG-KIELDGKCTDYSAFQLTISQVNKNEFKCSYGYFEYEDQCW--K 515

Query: 409 CP 414
           CP
Sbjct: 516 CP 517


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,164,708
Number of Sequences: 1657284
Number of extensions: 7199099
Number of successful extensions: 16624
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16609
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)