Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0783.Seq
(436 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.0
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.4
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 6.0
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 7.9
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.9
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 2.0
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +1
Query: 205 EHRDRILILNRRFLER---RSPTICSA--NVSVSPRMRCTDSAAHKCNYELFNRNNFSIR 369
++R+R +R ER R P I S+ N ++ ++ + NY N NN+
Sbjct: 58 KYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKL 117
Query: 370 YWSWNY 387
Y++ NY
Sbjct: 118 YYNINY 123
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 17 VAIRMPPVIPINH-----YLGVLKTN 79
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 17 VAIRMPPVIPINH-----YLGVLKTN 79
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.0
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 17 VAIRMPPVIPINH-----YLGVLKTN 79
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 289 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 387
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 289 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 387
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 289 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 387
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 289 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 387
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +1
Query: 289 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 387
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.0 bits (42), Expect = 6.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 35 PVIPINHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSPL 148
P +N KT I R++ ++ YS+S F+P+
Sbjct: 287 PFFCVNIVTSYCKTC-ISGRAFQVLTWLGYSNSAFNPI 323
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 331 NYELFNRNNFSIRYWSWNY 387
NY N NN+ Y++ NY
Sbjct: 95 NYNNNNYNNYKKLYYNINY 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 7.9
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = +1
Query: 271 SANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNYRG 393
+ +VS P S Y F+ + +++ SW Y G
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNG 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,870
Number of Sequences: 438
Number of extensions: 2410
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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