Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0780.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   0.58 
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    23   5.4  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    23   5.4  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    22   9.5  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   9.5  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 0.58
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 232 LHRAHHCAAESLNRSVSHAADTSDTGNSPS 321
           +HR  HC     N +    +  S TG SPS
Sbjct: 408 IHRIQHCTCMLQNNARESISPASGTGMSPS 437


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 60  IVLALLLSRDQVAI*SLLNPIDF 128
           IV+ L L  DQV I   + P+DF
Sbjct: 102 IVMILKLLVDQVPILETMTPLDF 124


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 60  IVLALLLSRDQVAI*SLLNPIDF 128
           IV+ L L  DQV I   + P+DF
Sbjct: 102 IVMILKLLVDQVPILETMTPLDF 124


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -3

Query: 256 LRSG-ELDVTTLSKIFKTLV 200
           +R+G E+D T   KI+KT++
Sbjct: 244 IRAGLEMDPTAFKKIYKTIL 263


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 304 TGNSPSCSVVFLLLRCVASSQATWC 378
           T N   C ++ LLL  +  S + WC
Sbjct: 246 TRNVIRCELIALLLHYLHLSTSIWC 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,448
Number of Sequences: 2352
Number of extensions: 7830
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)