Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0779.Seq
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 33 0.089
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 33 0.089
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 33 0.089
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.089
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.089
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 30 0.83
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 28 2.5
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 28 2.5
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 28 2.5
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 28 2.5
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 28 3.4
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 28 3.4
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 28 3.4
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 28 3.4
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 27 5.9
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 2386 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 2444
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 102 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 160
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 468 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 526
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 2382 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 2440
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 120 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 178
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 64.1 bits (149), Expect = 4e-11
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 431 HLNAALYELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYE 255
H +L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE
Sbjct: 2505 HATCIANKLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYE 2563
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 33.1 bits (72), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 291 LDSAVHAAEGLRVNKAQVDANLELARAKINEITAK 187
LDS + + KA++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 33.1 bits (72), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 291 LDSAVHAAEGLRVNKAQVDANLELARAKINEITAK 187
LDS + + KA++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 33.1 bits (72), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 291 LDSAVHAAEGLRVNKAQVDANLELARAKINEITAK 187
LDS + + KA++DAN+E RAKI+EI K
Sbjct: 396 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 430
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 33.1 bits (72), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 291 LDSAVHAAEGLRVNKAQVDANLELARAKINEITAK 187
LDS + + KA++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 33.1 bits (72), Expect = 0.089
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 291 LDSAVHAAEGLRVNKAQVDANLELARAKINEITAK 187
LDS + + KA++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 29.9 bits (64), Expect = 0.83
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 LRQREQRYPTEDDERDPVEARPHVREAPQQHA 359
+++RE R ED R P+E + ++ E+ +QHA
Sbjct: 160 IKRREMRQKMEDSGRLPLERQKYMHESRRQHA 191
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 635 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 682
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 565 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 612
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 380 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 427
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 424 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 471
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 565 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 612
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 482 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 529
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 288 PTEDDERDPVE---ARPHVREAPQQHAELXRVHQVLHQEQSAQLIQGG 422
PT DD D ++ A+P E+ ++H E + + +H E GG
Sbjct: 750 PTADDNMDFLDFVTAKPEKTESVEEHIEAPMIVEPVHAENETAAAAGG 797
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 LVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELXRVHQVLHQEQ 398
++ +Q++QR+ R+ + RE +QH + + Q LHQ+Q
Sbjct: 382 MIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ--QAQQALHQQQ 427
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 LVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELXRVHQVLHQEQ 398
++ +Q++QR+ R+ + RE +QH + + Q LHQ+Q
Sbjct: 894 MIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ--QAQQALHQQQ 939
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 LVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELXRVHQVLHQEQ 398
++ +Q++QR+ R+ + RE +QH + + Q LHQ+Q
Sbjct: 899 MIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ--QAQQALHQQQ 944
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 LVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELXRVHQVLHQEQ 398
++ +Q++QR+ R+ + RE +QH + + Q LHQ+Q
Sbjct: 899 MIAEQQQQQRHAAAQQLREREQREQRERERERQHQQ--QAQQALHQQQ 944
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 279 QRYPTEDDERDPVEARPHVREAPQQHAELXRVHQVLHQ 392
Q+Y ++ PV+ RP V++ Q H E + ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 267 RQREQRYPTEDDERDPVEARPHVREAPQQHAELXRVHQ 380
R++ Y ED++R+ +E+RP R + R H+
Sbjct: 242 RRQYPEYEYEDEDREEMESRPRRRHSNNARGRSTRKHR 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,424,777
Number of Sequences: 27780
Number of extensions: 88277
Number of successful extensions: 356
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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