Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0778.Seq
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    23   6.2  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.2  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    23   6.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   8.2  

>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -1

Query: 392 PVCMASVXVXHHXC*IXHHXNSLQPXT-SFLSGPTEI 285
           P+   +  + HH   I HH   +   T S + GP+ +
Sbjct: 191 PIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSHL 227


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -1

Query: 392 PVCMASVXVXHHXC*IXHHXNSLQPXT-SFLSGPTEI 285
           P+   +  + HH   I HH   +   T S + GP+ +
Sbjct: 193 PIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSHL 229


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -1

Query: 392 PVCMASVXVXHHXC*IXHHXNSLQPXT-SFLSGPTEI 285
           P+   +  + HH   I HH   +   T S + GP+ +
Sbjct: 191 PIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSHL 227


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
 Frame = -1

Query: 395 PPVCMASVXVXHHXC*IXHHXNSLQPXTSFLSGPT-EIQPQQSP 267
           PPV  +S         + HH +S       L GP   + P  SP
Sbjct: 77  PPVLSSSAQQQQQQQQLLHHPSSSPHSNHLLGGPNHHLPPGASP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,076
Number of Sequences: 2352
Number of extensions: 6000
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)