Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0778.Seq
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein. 132 4e-31
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 131 1e-30
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 131 1e-30
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 131 1e-30
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 131 1e-30
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 131 1e-30
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 131 1e-30
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 62 8e-10
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 62 8e-10
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 62 8e-10
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 62 8e-10
X06596-1|CAA29817.1| 688|Homo sapiens complement protein C1s pr... 29 9.1
M18767-1|AAA51853.1| 688|Homo sapiens C1S protein. 29 9.1
J04080-1|AAA51852.1| 688|Homo sapiens C1S protein. 29 9.1
BC056903-1|AAH56903.1| 688|Homo sapiens complement component 1,... 29 9.1
>AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein.
Length = 151
Score = 132 bits (320), Expect = 4e-31
Identities = 60/102 (58%), Positives = 72/102 (70%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 25 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKI 84
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXEXS 314
WCFGP+GTGPN L D +KGV Y +++ + F E S
Sbjct: 85 WCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEVS 126
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 590 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 649
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 650 WCFGPDGTGPNILTDITKGVQYLNEIK 676
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 654 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 709
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 590 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 649
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 650 WCFGPDGTGPNILTDITKGVQYLNEIK 676
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 654 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 709
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 90 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 149
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 150 WCFGPDGTGPNILTDITKGVQYLNEIK 176
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 154 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 209
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 590 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 649
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 650 WCFGPDGTGPNILTDITKGVQYLNEIK 676
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 654 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 709
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 249 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 308
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 309 WCFGPDGTGPNILTDITKGVQYLNEIK 335
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 313 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 368
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 131 bits (316), Expect = 1e-30
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = +3
Query: 9 LCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKI 188
LCLSKS N HNRL+MKA+P PDGL EDID+G V+ R + K RARYL EK E+ V EARKI
Sbjct: 590 LCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKI 649
Query: 189 WCFGPEGTGPNXLVDCSKGVXYSMKLR 269
WCFGP+GTGPN L D +KGV Y +++
Sbjct: 650 WCFGPDGTGPNILTDITKGVQYLNEIK 676
Score = 42.3 bits (95), Expect = 7e-04
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 200 PRGYRPQXPGGLLQRSXXLNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
P G P + + LNEIKDSVVAGFQWA EEN G F+ +D L
Sbjct: 654 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATK-EGALCEENMRGVRFDVHDVTL 709
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 62.1 bits (144), Expect = 8e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M A+P+ GL EDI+ V + K + K ++ + AR IW
Sbjct: 679 CFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIW 738
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 739 AFGPDATGPNILVD 752
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 62.1 bits (144), Expect = 8e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M A+P+ GL EDI+ V + K + K ++ + AR IW
Sbjct: 674 CFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIW 733
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 734 AFGPDATGPNILVD 747
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 62.1 bits (144), Expect = 8e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M A+P+ GL EDI+ V + K + K ++ + AR IW
Sbjct: 674 CFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIW 733
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 734 AFGPDATGPNILVD 747
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 62.1 bits (144), Expect = 8e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M A+P+ GL EDI+ V + K + K ++ + AR IW
Sbjct: 552 CFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIW 611
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 612 AFGPDATGPNILVD 625
>X06596-1|CAA29817.1| 688|Homo sapiens complement protein C1s
precursor protein.
Length = 688
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 51 MKAQPMPDGLPEDIDEGRVNPRDD--FKTRARYLTEKXEY 164
+K QP+ G+PE I+ G+V + F + RY E+ Y
Sbjct: 352 LKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYY 391
>M18767-1|AAA51853.1| 688|Homo sapiens C1S protein.
Length = 688
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 51 MKAQPMPDGLPEDIDEGRVNPRDD--FKTRARYLTEKXEY 164
+K QP+ G+PE I+ G+V + F + RY E+ Y
Sbjct: 352 LKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYY 391
>J04080-1|AAA51852.1| 688|Homo sapiens C1S protein.
Length = 688
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 51 MKAQPMPDGLPEDIDEGRVNPRDD--FKTRARYLTEKXEY 164
+K QP+ G+PE I+ G+V + F + RY E+ Y
Sbjct: 352 LKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYY 391
>BC056903-1|AAH56903.1| 688|Homo sapiens complement component 1, s
subcomponent protein.
Length = 688
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 51 MKAQPMPDGLPEDIDEGRVNPRDD--FKTRARYLTEKXEY 164
+K QP+ G+PE I+ G+V + F + RY E+ Y
Sbjct: 352 LKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYY 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,437,481
Number of Sequences: 237096
Number of extensions: 1007596
Number of successful extensions: 1829
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1828
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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