Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0778.Seq
(434 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 146 1e-35
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 145 3e-35
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 145 3e-35
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 145 3e-35
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 145 3e-35
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 61 6e-10
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 61 6e-10
AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p pro... 28 4.8
AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc finger/... 28 4.8
AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein. 28 4.8
AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,... 28 4.8
AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,... 28 4.8
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 146 bits (353), Expect = 1e-35
Identities = 63/102 (61%), Positives = 78/102 (76%)
Frame = +3
Query: 3 DQLCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEAR 182
DQ+CLSKS N HNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EK +Y VTEAR
Sbjct: 574 DQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGEVSAKDEFKARARYLSEKYDYDVTEAR 633
Query: 183 KIWCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXE 308
KIWCFGP+GTGPN ++DC+K V Y +++ + F + E
Sbjct: 634 KIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 675
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2
Query: 254 LNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
LNEIKDSVVAGFQWA A+EN G FN YD L
Sbjct: 658 LNEIKDSVVAGFQWASKEG-ILADENLRGVRFNIYDVTL 695
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p
protein.
Length = 844
Score = 145 bits (351), Expect = 3e-35
Identities = 63/102 (61%), Positives = 78/102 (76%)
Frame = +3
Query: 3 DQLCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEAR 182
DQ+CLSKS N HNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EK +Y VTEAR
Sbjct: 574 DQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEAR 633
Query: 183 KIWCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXE 308
KIWCFGP+GTGPN ++DC+K V Y +++ + F + E
Sbjct: 634 KIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 675
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2
Query: 254 LNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
LNEIKDSVVAGFQWA A+EN G FN YD L
Sbjct: 658 LNEIKDSVVAGFQWASKEG-ILADENLRGVRFNIYDVTL 695
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 145 bits (351), Expect = 3e-35
Identities = 63/102 (61%), Positives = 78/102 (76%)
Frame = +3
Query: 3 DQLCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEAR 182
DQ+CLSKS N HNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EK +Y VTEAR
Sbjct: 562 DQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEAR 621
Query: 183 KIWCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXE 308
KIWCFGP+GTGPN ++DC+K V Y +++ + F + E
Sbjct: 622 KIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 663
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2
Query: 254 LNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
LNEIKDSVVAGFQWA A+EN G FN YD L
Sbjct: 646 LNEIKDSVVAGFQWASKEG-ILADENLRGVRFNIYDVTL 683
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 145 bits (351), Expect = 3e-35
Identities = 63/102 (61%), Positives = 78/102 (76%)
Frame = +3
Query: 3 DQLCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEAR 182
DQ+CLSKS N HNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EK +Y VTEAR
Sbjct: 562 DQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEAR 621
Query: 183 KIWCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXE 308
KIWCFGP+GTGPN ++DC+K V Y +++ + F + E
Sbjct: 622 KIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 663
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2
Query: 254 LNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
LNEIKDSVVAGFQWA A+EN G FN YD L
Sbjct: 646 LNEIKDSVVAGFQWASKEG-ILADENLRGVRFNIYDVTL 683
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 145 bits (351), Expect = 3e-35
Identities = 63/102 (61%), Positives = 78/102 (76%)
Frame = +3
Query: 3 DQLCLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEAR 182
DQ+CLSKS N HNRL MKA PMPDGLPEDID G V+ +D+FK RARYL+EK +Y VTEAR
Sbjct: 574 DQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEAR 633
Query: 183 KIWCFGPEGTGPNXLVDCSKGVXYSMKLRTLLWLDFSGPAXE 308
KIWCFGP+GTGPN ++DC+K V Y +++ + F + E
Sbjct: 634 KIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 675
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +2
Query: 254 LNEIKDSVVAGFQWARXGXKXXAEENXXGGXFNXYDXXL 370
LNEIKDSVVAGFQWA A+EN G FN YD L
Sbjct: 658 LNEIKDSVVAGFQWASKEG-ILADENLRGVRFNIYDVTL 695
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p
protein.
Length = 975
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M ++P+ GL EDI+ G V + K + ++ + AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 737 AFGPDSTGPNILVD 750
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +3
Query: 12 CLSKSSNXHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKXEYXVTEARKIW 191
C +++ N N++ M ++P+ GL EDI+ G V + K + ++ + AR IW
Sbjct: 677 CFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIW 736
Query: 192 CFGPEGTGPNXLVD 233
FGP+ TGPN LVD
Sbjct: 737 AFGPDSTGPNILVD 750
>AY051905-1|AAK93329.1| 824|Drosophila melanogaster LD39491p
protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -1
Query: 362 HHXC*IXHHXNSLQPXTSFLSGPTEIQPQQSP*FH*VXNSFGAIHQXVGAGTLGAKA 192
HH HH N+ Q TS S P+ S V S A +G G G A
Sbjct: 113 HHHHPTHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGATGTGA 169
>AY036104-1|AAK63170.1| 975|Drosophila melanogaster zinc
finger/leucine zipper proteinDALF isoform C1 protein.
Length = 975
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -1
Query: 362 HHXC*IXHHXNSLQPXTSFLSGPTEIQPQQSP*FH*VXNSFGAIHQXVGAGTLGAKA 192
HH HH N+ Q TS S P+ S V S A +G G G A
Sbjct: 113 HHHHPTHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGATGTGA 169
>AF281146-1|AAK06386.1| 825|Drosophila melanogaster AF10 protein.
Length = 825
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -1
Query: 362 HHXC*IXHHXNSLQPXTSFLSGPTEIQPQQSP*FH*VXNSFGAIHQXVGAGTLGAKA 192
HH HH N+ Q TS S P+ S V S A +G G G A
Sbjct: 113 HHHHPTHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGATGTGA 169
>AE014297-559|AAF54065.2| 824|Drosophila melanogaster CG1070-PB,
isoform B protein.
Length = 824
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -1
Query: 362 HHXC*IXHHXNSLQPXTSFLSGPTEIQPQQSP*FH*VXNSFGAIHQXVGAGTLGAKA 192
HH HH N+ Q TS S P+ S V S A +G G G A
Sbjct: 113 HHHHPTHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGATGTGA 169
>AE014297-556|AAN13342.1| 976|Drosophila melanogaster CG1070-PC,
isoform C protein.
Length = 976
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -1
Query: 362 HHXC*IXHHXNSLQPXTSFLSGPTEIQPQQSP*FH*VXNSFGAIHQXVGAGTLGAKA 192
HH HH N+ Q TS S P+ S V S A +G G G A
Sbjct: 113 HHHHPTHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGATGTGA 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,839
Number of Sequences: 53049
Number of extensions: 300249
Number of successful extensions: 610
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -