Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0774.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 107 2e-22
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 107 2e-22
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 93 3e-18
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 91 1e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 89 6e-17
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 88 1e-16
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 86 7e-16
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 84 3e-15
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 79 1e-13
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 77 2e-13
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 77 4e-13
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 77 4e-13
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 75 1e-12
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 73 7e-12
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 71 3e-11
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 70 5e-11
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 66 4e-10
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 47 4e-04
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 45 0.002
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 45 0.002
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 41 0.025
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 41 0.025
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 39 0.10
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 38 0.24
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 38 0.24
UniRef50_A7PYF4 Cluster: Chromosome chr15 scaffold_37, whole gen... 36 0.72
UniRef50_A4YW52 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_UPI0000E49D66 Cluster: PREDICTED: similar to CG7908-PA;... 34 2.9
UniRef50_A3WCP4 Cluster: Uracil-DNA glycosylase:Phage SPO1 DNA p... 34 2.9
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 3.9
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 33 5.1
UniRef50_Q5KNU5 Cluster: IDN3-B, putative; n=2; Filobasidiella n... 33 5.1
UniRef50_Q0D4X0 Cluster: Os07g0599400 protein; n=2; cellular org... 33 6.7
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 33 6.7
UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 32 8.9
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 107 bits (257), Expect = 2e-22
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 6e-21
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 107 bits (257), Expect = 2e-22
Identities = 64/173 (36%), Positives = 85/173 (49%)
Frame = +3
Query: 78 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 258 LVTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXX 437
+ + RMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 438 XXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+GVP LVQ++G ++ FP + +VQ++ KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
Score = 102 bits (244), Expect = 7e-21
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 93.5 bits (222), Expect = 3e-18
Identities = 41/46 (89%), Positives = 41/46 (89%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP 397
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P
Sbjct: 176 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 221
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/104 (34%), Positives = 47/104 (45%)
Frame = +3
Query: 111 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKPVPNHGV 290
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS +
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 291 PDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWH 422
+ RMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/103 (44%), Positives = 55/103 (53%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP V GGGTHR+GQ AFGNMCR G P +
Sbjct: 35 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLN 94
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPGD 568
S+ P H + +PE+PLV++ + D
Sbjct: 95 QKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFAD 137
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 89.4 bits (212), Expect = 6e-17
Identities = 45/99 (45%), Positives = 55/99 (55%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQ SAESWGTGRAVARIP V GT RSGQGAFGNMCRGG P++
Sbjct: 60 GHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTT 119
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
+ ++ P H I +PELPLV++++
Sbjct: 120 EKRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNE 158
Score = 78.2 bits (184), Expect = 1e-13
Identities = 50/168 (29%), Positives = 69/168 (41%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
TG P LV ARG + P P + ++Q INKT A
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTA 168
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 88.2 bits (209), Expect = 1e-16
Identities = 57/168 (33%), Positives = 73/168 (43%)
Frame = +3
Query: 93 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKP 272
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 273 VPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXX 452
+ + RMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 453 XXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+ VP LV +RG + P P + +Q KTK+A F
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAF 169
Score = 78.2 bits (184), Expect = 1e-13
Identities = 44/102 (43%), Positives = 50/102 (49%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G SA SWGTGRAVARIP + GGGT SG GAFGNMCRGG P +
Sbjct: 58 GMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLH 117
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H I +PE+PLVV D G
Sbjct: 118 QKRFAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQG 159
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 85.8 bits (203), Expect = 7e-16
Identities = 45/96 (46%), Positives = 52/96 (54%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP V GGGTHR+GQ AFGNMCR G P +
Sbjct: 58 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLG 117
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVV 547
S+ P H I ++ E+PLV+
Sbjct: 118 QKRFATVSALAASGVPALLFARGHQISEVAEVPLVI 153
Score = 81.0 bits (191), Expect = 2e-14
Identities = 51/158 (32%), Positives = 66/158 (41%)
Frame = +3
Query: 93 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKP 272
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++ +
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 273 VPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXX 452
+ RMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 453 XXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQE 566
+GVP L+ ARG + P + ++V E
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFE 159
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 83.8 bits (198), Expect = 3e-15
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP 397
G++TSAESWGTGRAVARIP V GGGTHR+GQ AFGNMCRGG P
Sbjct: 59 GYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNP 104
Score = 62.1 bits (144), Expect = 1e-08
Identities = 43/168 (25%), Positives = 62/168 (36%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+G+ LV ARG + P + ++ + KTK A
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDA 167
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/98 (42%), Positives = 51/98 (52%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQ SAESWGTGRAVAR+P + G GT R+GQ AF N RGG P +
Sbjct: 59 GHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
+ S+ P H I+ +PELPLVV+D
Sbjct: 119 QRRFAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSD 156
Score = 56.0 bits (129), Expect = 6e-07
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Frame = +3
Query: 102 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQP---YCVSKRLVTKP 272
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP Y ++ +
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 273 VPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXX 452
G +P M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGG---HMYSPLKVWRRWHRMVNVTQRRF 122
Query: 453 XXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ P LV ARG + P P + V++I KTK+A
Sbjct: 123 AMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEA 167
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 77.4 bits (182), Expect = 2e-13
Identities = 41/98 (41%), Positives = 49/98 (50%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G+QTSA SWGTGRA++R P V+GGGTHRSGQ A+ N CR G P
Sbjct: 58 GYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLK 117
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
L S H +E +PELPLV+ D
Sbjct: 118 EKRLALAVSVAATASVPLVMSRGHRVESVPELPLVLDD 155
Score = 70.9 bits (166), Expect = 2e-11
Identities = 47/166 (28%), Positives = 67/166 (40%)
Frame = +3
Query: 90 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTK 269
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 270 PVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXX 449
L MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 450 XXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
T LV +RG ++ P P + ++ + KT+ A
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDA 166
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 76.6 bits (180), Expect = 4e-13
Identities = 48/106 (45%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP-------HEALAAL 418
G Q SAESWGTGRAVARIP V G GTHRSGQ AFGN CR G P H +
Sbjct: 60 GMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIK 119
Query: 419 APSRQPXTAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
TA + G R H I ++P++PLVV DK
Sbjct: 120 QKRHAAATAVAATGIVPLVLAR-------GHRISQVPQIPLVVEDK 158
Score = 73.7 bits (173), Expect = 3e-12
Identities = 48/164 (29%), Positives = 66/164 (40%), Gaps = 1/164 (0%)
Frame = +3
Query: 99 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKPV 275
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ + +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 276 PNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXXX 455
+ RM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 456 XXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
TG+ LV ARG + + P P + K++ KT A
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDA 168
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 76.6 bits (180), Expect = 4e-13
Identities = 40/98 (40%), Positives = 50/98 (51%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G+QTSA SWGTGRA+AR+P V+GGGTHR+GQ A+ N CR G P
Sbjct: 58 GYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLK 117
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
L S+ H IE + E+P+VV D
Sbjct: 118 EKRQALASALAATAVVPVVMSRGHRIEALREVPMVVDD 155
Score = 70.9 bits (166), Expect = 2e-11
Identities = 49/164 (29%), Positives = 66/164 (40%)
Frame = +3
Query: 96 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKPV 275
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 276 PNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXXX 455
+ M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 456 XXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
T V +V +RG ++ P + +++INKTK A
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDA 166
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 75.4 bits (177), Expect = 1e-12
Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP---HEALAALAPSR 430
G Q SAESWGTGRA+AR+P V+GGGT R+GQGAF N CR G P H A
Sbjct: 56 GMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVEN 115
Query: 431 QPXTAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
AE+ ++ AR H I + LP++V+D
Sbjct: 116 TKKIAEAMAVAASAQASLVEARG---HRISDVKMLPIIVSD 153
Score = 39.9 bits (89), Expect = 0.044
Identities = 38/161 (23%), Positives = 51/161 (31%)
Frame = +3
Query: 105 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKPVPNH 284
++ Y TV+ LP VF PIR DLV + +RQPY VSK +
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 285 GVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXXXXXX 464
+ RM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 465 XXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ LV+ARG + P + + + KTK A
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDA 164
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 72.5 bits (170), Expect = 7e-12
Identities = 42/100 (42%), Positives = 50/100 (50%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G Q SA SWGTGRAVARIP + G G+ R+GQGAFGNM R G P +
Sbjct: 59 GKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQ 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKS 559
+ S P S H I +P++PLVV KS
Sbjct: 119 MRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 58.0 bits (134), Expect = 2e-07
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 93 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKP 272
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS + +
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 273 VPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXX 452
+ MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 453 XXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTK-VQEINKTKQA 587
+ VP LV ARG + P P + +K + I KTKQA
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQA 168
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP 397
G TSA SWGTGRAV+R+P V G GTHRSGQGA N CRGG P
Sbjct: 54 GMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNP 99
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/142 (23%), Positives = 52/142 (36%)
Frame = +3
Query: 156 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLVTKPVPNHGVPDVLLPEFXXXXXXX 335
+P VF + IR D+V VH +M KN RQ Y VS +
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 336 XXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTGVPXLVQARGTL 515
R+F PT WR+WH + + ++ +RG
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 516 LKRFPSFPWL*PTKVQEINKTK 581
+K P P++ +++I KT+
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTR 160
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 69.7 bits (163), Expect = 5e-11
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAAL---APSR 430
G + SA SWGTGRA A +P V G G++R+GQGA+ N CRGG P L PSR
Sbjct: 56 GKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSR 115
Query: 431 QPXTAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
Q A + ++ AR H++ ++ E+P+VV D
Sbjct: 116 QRKFAIASAIAATAVVPLVQARG---HVLGEVKEVPIVVVD 153
Score = 44.8 bits (101), Expect = 0.002
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 3/169 (1%)
Frame = +3
Query: 90 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYC---VSKRL 260
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ ++ +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 261 VTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXX 440
V+ G +P F P RRW
Sbjct: 59 VSAISWGTGRAKACVPR---VNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSR 115
Query: 441 XXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
T V LVQARG +L P + VQEI +T+ A
Sbjct: 116 QRKFAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDA 164
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 66.5 bits (155), Expect = 4e-10
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGG 382
G+Q SA+SWG GR +ARIP ++G GT ++GQGA NMCRGG
Sbjct: 60 GNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGG 100
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G +TSAESWG G VA +P V+G +G+ A GG
Sbjct: 53 GFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPTPEKDWTQRVNRK 112
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
+ L S+ +P H+I+ +P LP+VV D+
Sbjct: 113 ERRAALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDE 151
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 99 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY R
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPR 51
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGG 334
G+QTSAESWGTGRA +P VRGGG
Sbjct: 49 GYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/96 (31%), Positives = 38/96 (39%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G Q +A SWG GRAVAR+P G G GA+ N RGG P +
Sbjct: 55 GVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLN 108
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVV 547
+ S+ H I +P +PLVV
Sbjct: 109 QRRYAVASALAASANAALVEARGHRIADVPSIPLVV 144
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 99 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 254
P V V+ V A P P VF P+RPD++N VH + K R PY VS+
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 40.7 bits (91), Expect = 0.025
Identities = 38/156 (24%), Positives = 51/156 (32%), Gaps = 7/156 (4%)
Frame = +3
Query: 141 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQ----PYCVSKRLVTKPVPNHGVPDVL-- 302
GA+ +P VF +PIR D+VN VH ++KN C K P VP
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 303 -LPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXT 479
P + WRRWH +
Sbjct: 75 PSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAAS 134
Query: 480 GVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
VP L+ ARG ++ P P + I KT +A
Sbjct: 135 AVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKA 170
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 40.7 bits (91), Expect = 0.025
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
G + S ES+G G +ARIP +G R G F RGG P + L
Sbjct: 79 GKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKK 135
Query: 440 TAESGLGS--SRCCYWRPXARSG*RHIIEKIPELPLVV 547
+ + S + Y A G H++EK+P LP+VV
Sbjct: 136 EKKLAIRSAIAATAYRSWVAARG--HVVEKVPSLPVVV 171
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 38.7 bits (86), Expect = 0.10
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +2
Query: 260 GHQTSAESWG--TGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQ 433
G SA+S TG ARI ++GGG R G+ RGG P + +
Sbjct: 53 GMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKIN 112
Query: 434 PXTAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVAD 553
+ L S+ +G HII+ I ELP+V++D
Sbjct: 113 KKEKKLALCSAIAATASKSTVAGRGHIIDGI-ELPIVISD 151
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.5 bits (83), Expect = 0.24
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 503 SLNERWDASSSNGCCQGRSPLSXVDATVPAPPGL 402
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 37.5 bits (83), Expect = 0.24
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP 397
G +TSA S G GR VAR+P ++G S + A NM RGG P
Sbjct: 66 GKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHP 106
>UniRef50_A7PYF4 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 536 EARESFQ*CASSLNERWD-ASSSNGCCQGRSPLSXVDA-TVPAPP 408
E + F+ C +SL E+W+ GCC G P S +D P+PP
Sbjct: 11 EGKGVFEICLNSLLEKWNKEEEEGGCCVGTEPTSVLDTRRSPSPP 55
>UniRef50_A4YW52 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 1795
Score = 34.3 bits (75), Expect = 2.2
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2
Query: 269 TSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPXTAE 448
T+A S G G + P +RGGG+ RSG+GA G G P V + APS+ A+
Sbjct: 1432 TAARSVGQGAELTSQP-IRGGGS-RSGRGASGAERVGPPAVEADATVRQSAPSKSVDPAK 1489
Query: 449 S 451
+
Sbjct: 1490 T 1490
>UniRef50_UPI0000E49D66 Cluster: PREDICTED: similar to CG7908-PA;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to CG7908-PA - Strongylocentrotus purpuratus
Length = 763
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 485 DASSSNGCCQGRSPLSXVDATVPAPPGLRGGEHTVHHDTC 366
DA+ N C+ +S + D P+PP LR G + + TC
Sbjct: 486 DATEQNAYCKAKSYCTGRDIRCPSPPDLRDGAGCIDNGTC 525
>UniRef50_A3WCP4 Cluster: Uracil-DNA glycosylase:Phage SPO1 DNA
polymerase-related protein; n=5; Sphingomonadales|Rep:
Uracil-DNA glycosylase:Phage SPO1 DNA polymerase-related
protein - Erythrobacter sp. NAP1
Length = 478
Score = 33.9 bits (74), Expect = 2.9
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 446 ESGLGSSRCCYWRPXARSG*RHII-EKIPELPLVVADKSPGDQQDQTG 586
E G+ + R C P A G R I+ E + PL++ + PGDQ+DQ G
Sbjct: 288 EQGIAACRDC---PIADCGTRAIMGEGAADAPLMIVGEQPGDQEDQQG 332
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 3.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 378 PRHMLPKAP*PDLWVPPPR 322
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 305 ARIPXVRGGGTHRSGQGAFGNMCRGG 382
AR P GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q5KNU5 Cluster: IDN3-B, putative; n=2; Filobasidiella
neoformans|Rep: IDN3-B, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1924
Score = 33.1 bits (72), Expect = 5.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 479 SSSNGCCQGRSPLSXVDATVPAPPGLRGGEHTVHHD-TCYRRHPDRT 342
S+ NGCC G S +T P PGL TVH+D + R D T
Sbjct: 134 STHNGCCVGNST-----STSPVTPGLMANSMTVHNDKQFFERFVDNT 175
>UniRef50_Q0D4X0 Cluster: Os07g0599400 protein; n=2; cellular
organisms|Rep: Os07g0599400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 139
Score = 32.7 bits (71), Expect = 6.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 272 SAESWGTGRAVARIPXVRGGGTH--RSGQGAFGNMCRGGPYVRPHEALAALAPSRQPXTA 445
+A++W T A AR RG R G+ A G P AA A +R+ A
Sbjct: 63 AAQAWATVAAPAR----RGAAAAPARRGEEAQGAAAAARALEAPAARGAAAARARRGSAA 118
Query: 446 ESGLGSSRCCYWR 484
S G+S CC WR
Sbjct: 119 PSPRGASPCCPWR 131
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRP 397
G +T+AES+G+GR A +P V+G S + AF GG P
Sbjct: 54 GKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHP 94
>UniRef50_Q08Q80 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 596
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -2
Query: 381 PPRHMLPKAP*PDLWV--PPPRTXGIRATARPVP 286
PP LP P PD +V PPP+ G A PVP
Sbjct: 352 PPGEALPPEPVPDSFVAEPPPQAAGFAPQAGPVP 385
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 165 RTGGA-WLHPAPSHSSLNTPTLKVGLPIDSFRYFSEAIPP 49
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,087,766
Number of Sequences: 1657284
Number of extensions: 11692842
Number of successful extensions: 34944
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 33264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34888
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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