Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0774.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    28   0.26 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    27   0.46 
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           27   0.61 
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           26   1.1  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           26   1.1  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   7.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   7.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.9  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPY 388
           G Q    S+G+G+    +P + G G  +SG  +FGN  +GG +
Sbjct: 123 GGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGGNF 164


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +2

Query: 266 QTSAESWGTGRAVARIPXVRGGGTHRSGQGAF-GNMCRGGPYVRPHEALAALAP 424
           QT+ + + TG    R     G  TH    G F       G  VRP + L  +AP
Sbjct: 148 QTTVKRYPTGVNATRYGTTGGNATHHRTTGVFVTRHSTTGSSVRPSKGLIPVAP 201


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 326 GGGTHRSGQGAFGNMCRGGPYVRPHEALAA-LAPSRQPXTAESGLGSSRCCYWR 484
           G GT  S Q  FG+M       RP+    A  A  R P T  SG G  R   WR
Sbjct: 146 GPGTVES-QDLFGDMMPQPQPARPYRVRRAPRAERRHPYTRRSG-GQQRSAGWR 197


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 VSWWTVCSPPRSPGGAGTVASTXD 441
           VSW   C+ P  PG  G VAS  D
Sbjct: 246 VSWGYGCAQPGYPGVYGRVASVRD 269


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 VSWWTVCSPPRSPGGAGTVASTXD 441
           VSW   C+ P  PG  G VAS  D
Sbjct: 246 VSWGYGCAQPGYPGVYGRVASVRD 269


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 583 CLVLLISWTFVGY 545
           C+V + SWTF GY
Sbjct: 176 CIVKIGSWTFDGY 188


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 476 SSNGCCQGRSPLSXVDATVPAPPGLRGGE 390
           +S GCC  +      +  +P P GL+G +
Sbjct: 89  TSGGCCLPKCFAEKGNRGLPGPMGLKGAK 117


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 384 GPPRHMLPKAP*PDLWVPPPR 322
           G P H LP    P L VPPP+
Sbjct: 108 GGPNHHLPPGASPGL-VPPPQ 127


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 131 DGAGCSQAPPVRIQGAHTSGPG 196
           DG     +PP+ + G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 341 RSGQGAFGNMCRGGPYVRP 397
           R+ Q    N+ R GP VRP
Sbjct: 914 RASQSPLSNLRRKGPQVRP 932


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,933
Number of Sequences: 2352
Number of extensions: 12197
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)