Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0774.Seq
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 107 3e-23
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 107 3e-23
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 107 3e-23
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 107 4e-23
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 106 5e-23
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 38 0.036
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 31 4.1
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 31 4.1
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 31 4.1
BC064919-1|AAH64919.1| 559|Homo sapiens C11orf61 protein protein. 29 9.5
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 133 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 174
Score = 103 bits (246), Expect = 6e-22
Identities = 59/169 (34%), Positives = 80/169 (47%)
Frame = +3
Query: 81 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRL 260
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 261 VTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXX 440
+ + RMFAPTK WRRWH
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132
Query: 441 XXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 133 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 181
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (257), Expect = 3e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEG 160
Score = 102 bits (245), Expect = 8e-22
Identities = 59/168 (35%), Positives = 79/168 (47%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 107 bits (256), Expect = 4e-23
Identities = 61/168 (36%), Positives = 81/168 (48%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV ++G ++ FP P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEA 167
Score = 104 bits (249), Expect = 3e-22
Identities = 55/102 (53%), Positives = 59/102 (57%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQT AESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE+ PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEG 160
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 106 bits (255), Expect = 5e-23
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADKSPG 565
+ S+ P H IE++PELPLVV DK G
Sbjct: 119 QKRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEG 160
Score = 101 bits (243), Expect = 1e-21
Identities = 59/168 (35%), Positives = 78/168 (46%)
Frame = +3
Query: 84 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKRLV 263
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 264 TKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXXXX 443
+ + RMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 444 XXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQA 587
+ +P LV +G ++ P P + KV+ KTK+A
Sbjct: 120 KRYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEA 167
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 37.5 bits (83), Expect = 0.036
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 503 SLNERWDASSSNGCCQGRSPLSXVDATVPAPPGL 402
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 388 CSPPRSPGGAGTVASTXDSGERPWQQ 465
CSP SPG +G+ + DSG+RP Q+
Sbjct: 2924 CSP--SPGASGSAGKSGDSGDRPGQK 2947
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 388 CSPPRSPGGAGTVASTXDSGERPWQQ 465
CSP SPG +G+ + DSG+RP Q+
Sbjct: 2010 CSP--SPGASGSAGKSGDSGDRPGQK 2033
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 388 CSPPRSPGGAGTVASTXDSGERPWQQ 465
CSP SPG +G+ + DSG+RP Q+
Sbjct: 1774 CSP--SPGASGSAGKSGDSGDRPGQK 1797
>BC064919-1|AAH64919.1| 559|Homo sapiens C11orf61 protein protein.
Length = 559
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +2
Query: 284 WGTGRAV-ARIPXVRGGGTHRSGQGAFGNMCRG-GPYVRPHEALAALAPSRQPXTAESGL 457
WG R V AR + G GT FG+ G Y R ALA L R P +
Sbjct: 116 WGNERLVEARYQQLEGAGT------VFGSKAPGPAMYERVSRALAELGYERTPSQCRERI 169
Query: 458 GSSRCCYWR 484
+ R CY R
Sbjct: 170 KTLRRCYSR 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,207,947
Number of Sequences: 237096
Number of extensions: 1867149
Number of successful extensions: 4918
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4876
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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