Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0774.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 107 1e-23
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 107 1e-23
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 107 1e-23
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 107 1e-23
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 100 3e-21
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 30 2.7
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 30 2.7
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 29 3.6
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 29 3.6
AE014298-2025|AAF48364.1| 227|Drosophila melanogaster CG13404-P... 29 3.6
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 29 3.6
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 29 4.8
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 29 4.8
AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p pro... 28 8.4
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 28 8.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 107 bits (257), Expect = 1e-23
Identities = 64/173 (36%), Positives = 85/173 (49%)
Frame = +3
Query: 78 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 258 LVTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXX 437
+ + RMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 438 XXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+GVP LVQ++G ++ FP + +VQ++ KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
Score = 102 bits (244), Expect = 4e-22
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 107 bits (257), Expect = 1e-23
Identities = 64/173 (36%), Positives = 85/173 (49%)
Frame = +3
Query: 78 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 258 LVTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXX 437
+ + RMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 438 XXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+GVP LVQ++G ++ FP + +VQ++ KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
Score = 102 bits (244), Expect = 4e-22
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 107 bits (257), Expect = 1e-23
Identities = 64/173 (36%), Positives = 85/173 (49%)
Frame = +3
Query: 78 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 258 LVTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXX 437
+ + RMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 438 XXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+GVP LVQ++G ++ FP + +VQ++ KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
Score = 102 bits (244), Expect = 4e-22
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 107 bits (257), Expect = 1e-23
Identities = 64/173 (36%), Positives = 85/173 (49%)
Frame = +3
Query: 78 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKR 257
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 258 LVTKPVPNHGVPDVLLPEFXXXXXXXXXXXXXXXXXXXXXXDRMFAPTKPWRRWHXXXXX 437
+ + RMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 438 XXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQEINKTKQAGIF 596
+GVP LVQ++G ++ FP + +VQ++ KTKQA IF
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIF 173
Score = 102 bits (244), Expect = 4e-22
Identities = 52/99 (52%), Positives = 59/99 (59%)
Frame = +2
Query: 260 GHQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPX 439
GHQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 440 TAESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 160
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 99.5 bits (237), Expect = 3e-21
Identities = 51/98 (52%), Positives = 58/98 (59%)
Frame = +2
Query: 263 HQTSAESWGTGRAVARIPXVRGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPXT 442
HQTSAESWGTGRAVARIP VRGGGTHRSGQGAFGNMCRGG P +
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 443 AESGLGSSRCCYWRPXARSG*RHIIEKIPELPLVVADK 556
L S+ P H+I+ + E PLVV+D+
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDE 98
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = +3
Query: 384 RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTGVPXLVQARGTLLKRFPSFPWL*PTKVQ 563
RMFAPTK +RRWH +GVP LVQ++G ++ FP + +VQ
Sbjct: 41 RMFAPTKTFRRWHRRVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQ 100
Query: 564 EINKTKQAGIF 596
++ KTKQA IF
Sbjct: 101 KVQKTKQAVIF 111
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 196
++GSP ++VG G G S APP + AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 196
++GSP ++VG G G S APP + AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 354 P*PDLWVPPPRTXGIRATARPVPHDSAL 271
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 354 P*PDLWVPPPRTXGIRATARPVPHDSAL 271
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014298-2025|AAF48364.1| 227|Drosophila melanogaster CG13404-PA
protein.
Length = 227
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Frame = +2
Query: 323 RGGGTHRSGQGAFGNMCRGGPYVRPHEALAALAPSRQPXTAESGLGSSRCCYWRPXARSG 502
+ G R+ G FG CR G R + A A S P + +G++ C + + SG
Sbjct: 11 KNGRRLRTFAGRFGYQCRSGNSARSGQQ-ATTAISTNPSSNRIEMGATASC--KKTSGSG 67
Query: 503 *-RH---IIEKIPEL----PLVVADKSPGDQQDQT 583
H K EL PL + K+P DQ D+T
Sbjct: 68 YPEHDDPSYRKCQELKVSPPLYIIPKTPHDQSDRT 102
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 354 P*PDLWVPPPRTXGIRATARPVPHDSAL 271
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 593 DASLFGLVDLLDFCRLQPREARESFQ*CASSLNERWDASSSN-GCCQGRSPLSXVDATVP 417
D L GL+ + P ++R+ F+ + ++R S N GC +PL + V
Sbjct: 392 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 451
Query: 416 APPG 405
PPG
Sbjct: 452 TPPG 455
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 593 DASLFGLVDLLDFCRLQPREARESFQ*CASSLNERWDASSSN-GCCQGRSPLSXVDATVP 417
D L GL+ + P ++R+ F+ + ++R S N GC +PL + V
Sbjct: 431 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 490
Query: 416 APPG 405
PPG
Sbjct: 491 TPPG 494
>AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p
protein.
Length = 788
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 390 TYGPPRHML-PKAP*PDLWVPPPRTXGIRATARPVP 286
T GPPRH+L P+ P P L PPP +R T P P
Sbjct: 402 TSGPPRHLLRPQMP-PGL--PPPHA-SLRPTYGPPP 433
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 390 TYGPPRHML-PKAP*PDLWVPPPRTXGIRATARPVP 286
T GPPRH+L P+ P P L PPP +R T P P
Sbjct: 2373 TSGPPRHLLRPQMP-PGL--PPPHA-SLRPTYGPPP 2404
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,747,510
Number of Sequences: 53049
Number of extensions: 568239
Number of successful extensions: 1829
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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