Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0773.Seq
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.6  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   8.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 83  SSLKNHYFHCFITYSVGRK 139
           SS    +FHC+     GRK
Sbjct: 416 SSFFQQFFHCYCPIKFGRK 434


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 158 YYRPRTASAQPSK 120
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 308 ALFFDRCTAPVKLPAWQC 255
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 308 ALFFDRCTAPVKLPAWQC 255
           +L+F  CTA  ++  W C
Sbjct: 223 SLWFINCTAKGRVAVWMC 240


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 217 SSPFKTPA*SGSRHCQAGSLTGAVH 291
           +S F+     GS H Q+GS+ G  H
Sbjct: 2   NSYFEQSGFYGSHHHQSGSVAGHHH 26


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 328 ELALGHLRYSLTDVPPQSNSP 266
           +L +G ++YS+  +  +SN P
Sbjct: 292 QLKIGEIKYSVNKLIFRSNDP 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,681
Number of Sequences: 336
Number of extensions: 2114
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)