SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0772.Seq
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa...   100   9e-21
UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;...    80   1e-14
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    69   4e-11
UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1; ...    55   6e-07
UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3; ...    54   1e-06
UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3; ...    52   4e-06
UniRef50_Q7QQI1 Cluster: GLP_748_557_1225; n=1; Giardia lamblia ...    47   1e-04
UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    46   4e-04
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ...    44   0.001
UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1; ...    34   1.2  
UniRef50_Q4S9Z6 Cluster: Chromosome undetermined SCAF14693, whol...    33   1.6  
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    33   2.7  
UniRef50_Q4RRS5 Cluster: Chromosome 16 SCAF15002, whole genome s...    32   3.6  
UniRef50_A4LZ01 Cluster: Beta-ketoacyl synthase; n=2; cellular o...    32   3.6  
UniRef50_Q6ZKZ5 Cluster: Putative uncharacterized protein OJ1715...    32   3.6  
UniRef50_Q6CME5 Cluster: Similar to sp|P39969 Saccharomyces cere...    32   4.8  
UniRef50_Q8CG16 Cluster: Complement C1r-A subcomponent precursor...    32   4.8  
UniRef50_A5ZYV6 Cluster: Putative uncharacterized protein; n=1; ...    31   6.3  
UniRef50_A6NJQ8 Cluster: Uncharacterized protein ENSP00000290575...    31   8.3  
UniRef50_Q6BIS4 Cluster: Similar to CA1657|IPF16022 Candida albi...    31   8.3  
UniRef50_P00736 Cluster: Complement C1r subcomponent precursor (...    31   8.3  

>UniRef50_A5PLD0 Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa
           group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 55

 Score =  100 bits (240), Expect = 9e-21
 Identities = 42/47 (89%), Positives = 45/47 (95%)
 Frame = +2

Query: 2   AHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSLTLVWHCKET 142
           AHEW+NEIPTVP  YLAKPQPRERAW+NQRGKKTLLSLTLVWHC+ET
Sbjct: 9   AHEWMNEIPTVPTCYLAKPQPRERAWQNQRGKKTLLSLTLVWHCEET 55


>UniRef50_UPI0000D57947 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 70

 Score = 80.2 bits (189), Expect = 1e-14
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = -2

Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLD 45
           SPTYATPLMSPYNARLESSSTGSSFPA+  KPVPLAVVSLD
Sbjct: 13  SPTYATPLMSPYNARLESSSTGSSFPANFSKPVPLAVVSLD 53


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 68.5 bits (160), Expect = 4e-11
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = -2

Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHA 3
           +PTY TPL S +   LESSSTGSSFPADS KPVPL VVSLDSR     S  SIHA
Sbjct: 54  APTYTTPLKSFHKVGLESSSTGSSFPADSAKPVPLVVVSLDSRQDSGISL-SIHA 107


>UniRef50_A4VF71 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 70

 Score = 54.8 bits (126), Expect = 6e-07
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -2

Query: 134 YNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQ 30
           +  RLESSSTGSSFPAD  KPVPLA+ SLDSR GQ
Sbjct: 19  HKVRLESSSTGSSFPADYSKPVPLAMGSLDSRQGQ 53


>UniRef50_Q4P3R9 Cluster: Putative uncharacterized protein; n=3;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 160

 Score = 54.0 bits (124), Expect = 1e-06
 Identities = 43/101 (42%), Positives = 49/101 (48%)
 Frame = -1

Query: 396 LADAPPQSNSPPGSVLQXXPAEVLYXXERFRQVTALHAWNXTPCXRRFIDRAPLPPNRVS 217
           L D PPQ NSPP +V     A +L        +T LH W                   +S
Sbjct: 71  LTDVPPQPNSPPDNVSNSDQAYML--------LTPLH-W-------------------IS 102

Query: 216 NETMKVVVFQRRSREXISHLCYTSHVSLQCQTRVKLNRVFF 94
            ETM+VVVF RR     SHL YT HVS QCQTRVKLN   +
Sbjct: 103 KETMEVVVFHRRRS---SHLFYTLHVSSQCQTRVKLNHAAY 140


>UniRef50_Q6L6Z5 Cluster: RRNA intron-encoded endonuclease; n=3;
           Thermoproteaceae|Rep: RRNA intron-encoded endonuclease -
           Thermoproteus sp. IC-061
          Length = 234

 Score = 52.0 bits (119), Expect = 4e-06
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +2

Query: 5   HEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSLTLVWHC 133
           HEWINE+PTVP    A P P  ++W+ +RG+K+L S T    C
Sbjct: 180 HEWINEVPTVPARGPANPPPGAQSWDPRRGEKSLWSFTAACRC 222


>UniRef50_Q7QQI1 Cluster: GLP_748_557_1225; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_748_557_1225 - Giardia lamblia ATCC
           50803
          Length = 222

 Score = 47.2 bits (107), Expect = 1e-04
 Identities = 24/41 (58%), Positives = 25/41 (60%)
 Frame = +1

Query: 10  MD*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSSLAL 132
           MD R SHCP     E  A GTG G  AG+EDP ELDSS  L
Sbjct: 1   MDQRGSHCPEPRLREPPASGTGEGRPAGQEDPFELDSSPGL 41


>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 45.6 bits (103), Expect = 4e-04
 Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
 Frame = -1

Query: 396 LADAPPQSNSPPGSVLQXXPAEVLYXXERFRQVTALHAWNXTPCXRRFIDRAPLPPNRVS 217
           L D PPQ NSPP +V +              + T +  W      RR     P   N+++
Sbjct: 176 LTDVPPQPNSPPDNVFRPD------------RPTKVSLWIKKEGQRR----PPDSRNKLN 219

Query: 216 N-ETMKVVVFQRRSREXISHLCYTSHVSLQCQTRVKLNRVFFP 91
           N ++  +  F   S    SHL YTS V  Q +TRVKLNRVFFP
Sbjct: 220 NVKSSGISTFAVSS----SHLSYTSQVISQSRTRVKLNRVFFP 258



 Score = 44.0 bits (99), Expect = 0.001
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -2

Query: 161 TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR 18
           +Y + ++S    R++ +     FPADS K VPL +VSLDSR GQWE R
Sbjct: 237 SYTSQVISQSRTRVKLNRV--FFPADSAKAVPLLLVSLDSRKGQWEFR 282


>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
           50803
          Length = 329

 Score = 43.6 bits (98), Expect = 0.001
 Identities = 24/40 (60%), Positives = 25/40 (62%)
 Frame = -2

Query: 122 LESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHA 3
           LESSS GSS PA  P PVP A  S     GQW+ R SIHA
Sbjct: 178 LESSSKGSSCPAGRPSPVPEAGGSRRRGSGQWDPRWSIHA 217


>UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 421

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 2   AHEWINEIPTVPIYYLAKP 58
           AHEWIN+ PT+ +YY  KP
Sbjct: 403 AHEWINKNPTILVYYPTKP 421


>UniRef50_Q4S9Z6 Cluster: Chromosome undetermined SCAF14693, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14693, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 125

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -2

Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*G 33
           SP   TP +SP+++ L  SS+ S  P  SP P P AV+  + + G
Sbjct: 47  SPEQDTPPVSPHSSLLSPSSSCSPPPFYSPPPSPTAVLFCEDKAG 91


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 388 CAAPVKLAAWQCPPXGSR 335
           C APVKL  W CP  GSR
Sbjct: 75  CTAPVKLPTWHCPRSGSR 92


>UniRef50_Q4RRS5 Cluster: Chromosome 16 SCAF15002, whole genome
            shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 16
            SCAF15002, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1278

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 167  SPTYATPLMSP-YNARLESSSTGSSFPADSPKPVP 66
            SPT      SP Y+A +  +ST +S+P+ SP P P
Sbjct: 1099 SPTQGARQPSPSYHAHMSYASTAASYPSQSPSPPP 1133


>UniRef50_A4LZ01 Cluster: Beta-ketoacyl synthase; n=2; cellular
           organisms|Rep: Beta-ketoacyl synthase - Geobacter
           bemidjiensis Bem
          Length = 2396

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -2

Query: 119 ESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR*SIHA 3
           ES +T S  PA   K  P+AVV LD+R G+W+   S  A
Sbjct: 451 ESEATASPAPA---KGCPIAVVGLDARFGEWQDLTSFQA 486


>UniRef50_Q6ZKZ5 Cluster: Putative uncharacterized protein
           OJ1715_A07.12; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1715_A07.12 - Oryza sativa subsp. japonica (Rice)
          Length = 291

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = +2

Query: 230 GGSGARSINRRXHGVSFQACRAVTWRKRSXXYKTSAGXXWRTLPGGEFDW 379
           GG GAR  +RR HGV+  A  A    +R      +A   W  LP     W
Sbjct: 139 GGGGARR-HRRAHGVAHHAAHADRSHRRLEGRGRTAALRWLDLPPAALRW 187


>UniRef50_Q6CME5 Cluster: Similar to sp|P39969 Saccharomyces
           cerevisiae YER114c BOI2 budding protein; n=1;
           Kluyveromyces lactis|Rep: Similar to sp|P39969
           Saccharomyces cerevisiae YER114c BOI2 budding protein -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1015

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -2

Query: 194 FFSDDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 72
           F S  RA + P+Y +P+  P +  + +SS+GS     SP+P
Sbjct: 413 FASPRRAPKPPSYPSPVQPPKSPMVSASSSGSGGRFLSPQP 453


>UniRef50_Q8CG16 Cluster: Complement C1r-A subcomponent precursor
           (EC 3.4.21.41) (Complement component 1, r-A
           subcomponent) [Contains: Complement C1r-A subcomponent
           heavy chain; Complement C1r-A subcomponent light chain];
           n=28; Amniota|Rep: Complement C1r-A subcomponent
           precursor (EC 3.4.21.41) (Complement component 1, r-A
           subcomponent) [Contains: Complement C1r-A subcomponent
           heavy chain; Complement C1r-A subcomponent light chain]
           - Mus musculus (Mouse)
          Length = 707

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  LGE  GK+ P +LD+S
Sbjct: 243 DHQQVHCPYD-QLQIYANGKNLGEFCGKQRPPDLDTS 278


>UniRef50_A5ZYV6 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 114

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 382 APVKLAAWQCPPXGSRR 332
           APVKL  W CP  GSRR
Sbjct: 56  APVKLPVWHCPTAGSRR 72


>UniRef50_A6NJQ8 Cluster: Uncharacterized protein ENSP00000290575;
           n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
           ENSP00000290575 - Homo sapiens (Human)
          Length = 653

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 243 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 278


>UniRef50_Q6BIS4 Cluster: Similar to CA1657|IPF16022 Candida
           albicans IPF16022 unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to CA1657|IPF16022 Candida
           albicans IPF16022 unknown function - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 1048

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -1

Query: 243 APLPPNRVSNETMKVVVFQRRSREXISHLCYTSHVSLQCQTRVK 112
           +P PP+R+SN T+K +  ++++ E IS +   S  S+Q    VK
Sbjct: 829 SPTPPSRLSNATLKRLEAKKKAGERISPVRSNSVRSIQASPVVK 872


>UniRef50_P00736 Cluster: Complement C1r subcomponent precursor (EC
           3.4.21.41) (Complement component 1, r subcomponent)
           [Contains: Complement C1r subcomponent heavy chain;
           Complement C1r subcomponent light chain]; n=15;
           Tetrapoda|Rep: Complement C1r subcomponent precursor (EC
           3.4.21.41) (Complement component 1, r subcomponent)
           [Contains: Complement C1r subcomponent heavy chain;
           Complement C1r subcomponent light chain] - Homo sapiens
           (Human)
          Length = 705

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,781,906
Number of Sequences: 1657284
Number of extensions: 7163792
Number of successful extensions: 20416
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 19764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20401
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -