Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0772.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   0.58 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   3.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   7.2  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    22   7.2  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   7.2  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.8 bits (54), Expect = 0.58
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 305 RKRSXXYKTSAGXXWRTLPGGEFDWG 382
           R+RS  Y TS+G    TLPG +   G
Sbjct: 15  RRRSSVYTTSSGETGITLPGDDHSIG 40


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 379 PVKLAAWQCPP 347
           PV LA+WQ PP
Sbjct: 634 PVPLASWQLPP 644


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 181 SSLKNHYFHCFITYSVGRK 237
           SS    +FHC+     GRK
Sbjct: 403 SSFFQQFFHCYCPVKFGRK 421


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 22   DSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
            +SH P ++        T LG SAG     E+D++
Sbjct: 2432 NSHVPDIVGVLNNHFMTALGRSAGDVQSYEIDAN 2465


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 104 GSSFPADSPKPVP 66
           G   P D+P+PVP
Sbjct: 58  GDELPEDAPEPVP 70


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 107 TGSSFPADSPKPVPL 63
           TGSS P  +P+P P+
Sbjct: 177 TGSSSPQITPRPTPV 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,776
Number of Sequences: 2352
Number of extensions: 7173
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)