Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0772.Seq
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 1.4
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 1.4
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 1.4
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 1.4
AK090484-1|BAC03465.1| 261|Homo sapiens FLJ00406 protein protein. 30 3.3
AK056342-1|BAB71156.1| 223|Homo sapiens protein ( Homo sapiens ... 30 3.3
AK054876-1|BAB70818.1| 175|Homo sapiens protein ( Homo sapiens ... 30 3.3
AK027743-1|BAB55335.1| 223|Homo sapiens protein ( Homo sapiens ... 30 3.3
AF269290-1|AAG23173.1| 227|Homo sapiens unknown protein. 30 3.3
BC040516-1|AAH40516.1| 859|Homo sapiens SGIP1 protein protein. 28 9.9
AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AL356913-1|CAI22672.1| 859|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 28 9.9
AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AL354978-5|CAH71845.1| 859|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AL139147-2|CAI21942.1| 859|Homo sapiens SH3-domain GRB2-like (e... 28 9.9
AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant pr... 28 9.9
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 13 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 13 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 13 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 13 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>AK090484-1|BAC03465.1| 261|Homo sapiens FLJ00406 protein protein.
Length = 261
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 367 AAWQCPPXGSRRSFIRXRAFPPGHRSARLERXTVXPPIYRPR 242
A+W C + +S +R P AR + TV P++RP+
Sbjct: 49 ASWSCTALRAPQSCLRAATVRPVTLQARADSPTVPEPVHRPQ 90
>AK056342-1|BAB71156.1| 223|Homo sapiens protein ( Homo sapiens
cDNA FLJ31780 fis, clone NT2RI2008221, weakly similar to
CORNIFIN B. ).
Length = 223
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 367 AAWQCPPXGSRRSFIRXRAFPPGHRSARLERXTVXPPIYRPR 242
A+W C + +S +R P AR + TV P++RP+
Sbjct: 11 ASWSCTALRAPQSCLRAATVRPVTLQARADSPTVPEPVHRPQ 52
>AK054876-1|BAB70818.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ30314 fis, clone BRACE2003527. ).
Length = 175
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 367 AAWQCPPXGSRRSFIRXRAFPPGHRSARLERXTVXPPIYRPR 242
A+W C + +S +R P AR + TV P++RP+
Sbjct: 11 ASWSCTALRAPQSCLRAATVRPVTLQARADSPTVPEPVHRPQ 52
>AK027743-1|BAB55335.1| 223|Homo sapiens protein ( Homo sapiens
cDNA FLJ14837 fis, clone OVARC1001711, weakly similar to
CORNIFIN B. ).
Length = 223
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 367 AAWQCPPXGSRRSFIRXRAFPPGHRSARLERXTVXPPIYRPR 242
A+W C + +S +R P AR + TV P++RP+
Sbjct: 11 ASWSCTALRAPQSCLRAATVRPVTLQARADSPTVPEPVHRPQ 52
>AF269290-1|AAG23173.1| 227|Homo sapiens unknown protein.
Length = 227
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 367 AAWQCPPXGSRRSFIRXRAFPPGHRSARLERXTVXPPIYRPR 242
A+W C + +S +R P AR + TV P++RP+
Sbjct: 16 ASWSCTALRAPQSCLRAATVRPVTLQARADSPTVPEPVHRPQ 57
>BC040516-1|AAH40516.1| 859|Homo sapiens SGIP1 protein protein.
Length = 859
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 323 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 356
>AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 319 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 352
>AL356913-1|CAI22672.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 323 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 356
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 28 HCPYLLSSETTAKGTGLGESAGKEDPVELDSSLAL*GDMRGVA*VGDRFARSSLKNHY 201
H P + + G GESAG + SS++ D G + +R + S+ +NHY
Sbjct: 1562 HEPSTRAGSSRHSQVGQGESAGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHY 1619
>AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 319 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 352
>AL354978-5|CAH71845.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 323 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 356
>AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 319 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 352
>AL139147-2|CAI21942.1| 859|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 859
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 323 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 356
>AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant
protein protein.
Length = 856
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 63
SP + TP ++P + +T + PADSP P PL
Sbjct: 347 SPEHVTPELTPREKVVSPPATPDN-PADSPAPGPL 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,130,529
Number of Sequences: 237096
Number of extensions: 1144135
Number of successful extensions: 2500
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2499
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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