Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0772.Seq
(399 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 28 4.0
BT030260-1|ABN49399.1| 128|Drosophila melanogaster IP18368p pro... 28 5.3
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 28 5.3
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 28 5.3
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 28 5.3
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 28 5.3
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 28 5.3
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 28 5.3
AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p pro... 27 7.0
AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA... 27 7.0
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 167 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 72
+P++ + S Y A +S+S+G +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184
>BT030260-1|ABN49399.1| 128|Drosophila melanogaster IP18368p
protein.
Length = 128
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 315 RXRIKLLRXPXGGHC-QAASLTGAAH 389
R R+KLL P G HC +AA G+ H
Sbjct: 92 RHRLKLLLPPAGSHCVRAAEAGGSKH 117
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 179 RAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 51
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p
protein.
Length = 702
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 185 DDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPK 75
D A +P + TP + + LE +G+S PAD K
Sbjct: 216 DGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQK 252
>AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA
protein.
Length = 702
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 185 DDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPK 75
D A +P + TP + + LE +G+S PAD K
Sbjct: 216 DGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQK 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,222,492
Number of Sequences: 53049
Number of extensions: 342784
Number of successful extensions: 1225
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -