Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0772.Seq
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    27   3.7  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    27   3.7  
Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    27   5.0  
Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    26   8.7  
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    26   8.7  
U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -1

Query: 399 SLADAPPQSNSPP-GSVLQXXPAEVLYXXERFRQ 301
           ++A APP+S SPP  S+ +  P E+    E FR+
Sbjct: 213 AVAPAPPRSPSPPRKSMFENLPPEMKEKNEMFRK 246


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -2

Query: 188 SDDRAXRSPTYATP----LMSPYNARLESSSTGSSFPAD-SPKP 72
           +DD   R P + +     L  PY +   SSS+ SS P+D +P+P
Sbjct: 681 NDDSDSRFPAFKSSSVAMLTEPYKSSSSSSSSTSSIPSDPAPRP 724


>Z83238-6|CAB05800.1|  943|Caenorhabditis elegans Hypothetical
           protein T08G3.7 protein.
          Length = 943

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 38  IYYLAKPQPRERAW------ENQRGKKTLL 109
           +YY  KP   ER W      +NQ GK TLL
Sbjct: 589 LYYFGKPLDYERRWRYSLFLDNQDGKNTLL 618


>Z81531-5|CAB04319.1| 1152|Caenorhabditis elegans Hypothetical
           protein F36D3.5 protein.
          Length = 1152

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 38  IYYLAKPQPRERAW------ENQRGKKTLL 109
           +YY  KP   ER W      +NQ GK TLL
Sbjct: 790 LYYFGKPLDYERRWRYSLFLDNQGGKNTLL 819


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
           protein F26D2.10 protein.
          Length = 1213

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 38  IYYLAKPQPRERAW------ENQRGKKTLL 109
           +YY  KP   ER W      +NQ GK TLL
Sbjct: 851 LYYFGKPLDYERRWRYSLFLDNQDGKNTLL 880


>Z32679-2|CAA83592.1|  385|Caenorhabditis elegans Hypothetical
           protein C05B5.2 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 194 FFSDDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPK 75
           F+S+  A RS +   P+MS     + +++T +  PA S K
Sbjct: 46  FYSNITAPRSTSVLAPVMSSLEVYINTTTTSAFAPAQSIK 85


>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
           protein R02F2.2 protein.
          Length = 1182

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 146 LMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR 18
           +++P +A    SST SS P   P+P   A VS  +R   + SR
Sbjct: 1   MLNPNDADDSDSSTDSSPPVAVPRPKRSATVSPSTRNSFYNSR 43


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 119  ESSSTGSSFPADSPKP 72
            ESSSTGSS  +D P+P
Sbjct: 1453 ESSSTGSSSSSDDPRP 1468


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 119  ESSSTGSSFPADSPKP 72
            ESSSTGSS  +D P+P
Sbjct: 1453 ESSSTGSSSSSDDPRP 1468


>Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -2

Query: 191 FSDDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 66
           FSDD A    T A     P + + ESSS  S     + K  P
Sbjct: 286 FSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTP 327


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -2

Query: 191 FSDDRAXRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 66
           FSDD A    T A     P + + ESSS  S     + K  P
Sbjct: 561 FSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTP 602


>U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical
           protein B0432.7 protein.
          Length = 621

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 40  LLSSETTAKGTGLGESAGKEDPVELDSSLAL*GDMRGVA*VGDRFARSSLKNHYFHCFIT 219
           + S  TT+    + +S+  ++   LD   AL G +R VA + DR  R SLKN     F+T
Sbjct: 32  IFSLATTSAARYVSDSSA-DNTTRLDE--ALNGMIRYVADM-DRATRLSLKNQQLKEFLT 87

Query: 220 YS 225
           Y+
Sbjct: 88  YT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,856,184
Number of Sequences: 27780
Number of extensions: 161588
Number of successful extensions: 446
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)